RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LRFN5Q96NI6 719 aa23.51■■□□□ 1.35
HLA-C-209ENST00000495835 GPR87Q9BY21 358 aa23.51■■□□□ 1.35
HLA-C-209ENST00000495835 SLC25A18Q9H1K4 315 aa23.51■■□□□ 1.35
HLA-C-209ENST00000495835 MRM3Q9HC36 420 aaKnown RBP23.51■■□□□ 1.35
HLA-C-209ENST00000495835 SOHLH2Q9NX45 425 aa23.51■■□□□ 1.35
HLA-C-209ENST00000495835 GSAPA4D1B5 854 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 BTN3A3O00478 584 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 BTN3A1O00481 513 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 OR1I1O60431 355 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 CPNE3O75131 537 aaKnown RBP23.5■■□□□ 1.35
HLA-C-209ENST00000495835 TIAF1O95411 115 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 F8A1P23610 371 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 SARNPP82979 210 aaKnown RBP23.5■■□□□ 1.35
HLA-C-209ENST00000495835 LRRC8BQ6P9F7 803 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 MICALCLQ6ZW33 695 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 ADGRF3Q8IZF5 1079 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 RASGEF1CQ8N431 466 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 APOBEC4Q8WW27 367 aaKnown RBP23.5■■□□□ 1.35
HLA-C-209ENST00000495835 PBKQ96KB5 322 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 TREX1Q9NSU2 369 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 CATSPERZQ9NTU4 200 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 OR6C2Q9NZP2 312 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 TTC7AQ9ULT0 858 aaPredicted RBP23.5■■□□□ 1.35
HLA-C-209ENST00000495835 BSNQ9UPA5 3926 aa23.5■■□□□ 1.35
HLA-C-209ENST00000495835 TLN1Q9Y490 2541 aaKnown RBP23.5■■□□□ 1.35
HLA-C-209ENST00000495835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 SLC9B1P1A6NJY1 282 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 BHMG1C9JSJ3 638 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 CD3EAPO15446 510 aaKnown RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 SCRG1O75711 98 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 CXCR5P32302 372 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 KCNJ1P48048 391 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 ARCN1P48444 511 aaKnown RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 POLE2P56282 527 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 SESN2P58004 480 aaPredicted RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 PRKG2Q13237 762 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 DNAJC21Q5F1R6 531 aaKnown RBP23.49■■□□□ 1.35
HLA-C-209ENST00000495835 LRRC6Q86X45 466 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 SLC22A15Q8IZD6 547 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 PRELID2Q8N945 189 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 HGH1Q9BTY7 390 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 KIFC1Q9BW19 673 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 AP1M1Q9BXS5 423 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 TWSG1Q9GZX9 223 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 CHRNA10Q9GZZ6 450 aa23.49■■□□□ 1.35
HLA-C-209ENST00000495835 PIPSLA2A3N6 862 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 PRMT5O14744 637 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-209ENST00000495835 GPC4O75487 556 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 MAGEA6P43360 314 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 NFATC3Q12968 1075 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 KCNAB2Q13303 367 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 DNASE1L3Q13609 305 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 GPR19Q15760 415 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 ZNF517Q6ZMY9 492 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-209ENST00000495835 TMEM126BQ8IUX1 230 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 OR5AR1Q8NGP9 310 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 TRAPPC9Q96Q05 1148 aa23.48■■□□□ 1.35
HLA-C-209ENST00000495835 NAP1L3Q99457 506 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-209ENST00000495835 HEMK1Q9Y5R4 338 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-209ENST00000495835 J3QKU1 62 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 KPNA5O15131 536 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 CREG1O75629 220 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 NTRK1P04629 796 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 RPN2P04844 631 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 PRKAR1AP10644 381 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 OAS2P29728 719 aaKnown RBP23.47■■□□□ 1.35
HLA-C-209ENST00000495835 CCR7P32248 378 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 SEMA3AQ14563 771 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 BRD3Q15059 726 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 C16orf46Q6P387 395 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 SPESP1Q6UW49 350 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 HOOK3Q86VS8 718 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 CPT1BQ92523 772 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 PPM1MQ96MI6 270 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 PANX3Q96QZ0 392 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 ACTR10Q9NZ32 417 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 SERTAD3Q9UJW9 196 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 ICKQ9UPZ9 632 aa23.47■■□□□ 1.35
HLA-C-209ENST00000495835 PFDN6O15212 129 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 APOA4P06727 396 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 KLK3P07288 261 aaPredicted RBP23.46■■□□□ 1.35
HLA-C-209ENST00000495835 ST6GAL1P15907 406 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 RPS3P23396 243 aaKnown RBP eCLIP23.46■■□□□ 1.351e-7■■■■□ 20
HLA-C-209ENST00000495835 FBXO38Q6PIJ6 1188 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 UNC5AQ6ZN44 842 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 CT55Q8WUE5 264 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 CDYLQ9Y232 598 aa23.46■■□□□ 1.35
HLA-C-209ENST00000495835 MRPS18BQ9Y676 258 aaKnown RBP23.46■■□□□ 1.35
HLA-C-209ENST00000495835 KATNA1O75449 491 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 SLCO2B1O94956 709 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 AOAHP28039 575 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 RPS15P62841 145 aaKnown RBP23.45■■□□□ 1.34
HLA-C-209ENST00000495835 HSPA14Q0VDF9 509 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 DEFB109BQ30KR1 87 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 UNC5DQ6UXZ4 953 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 SDCCAG8Q86SQ7 713 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-209ENST00000495835 TCTN2Q96GX1 697 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 TCF12Q99081 682 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 P2RY12Q9H244 342 aa23.45■■□□□ 1.34
HLA-C-209ENST00000495835 XKR8Q9H6D3 395 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms