RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-205	ENST00000495653	FBXO38	Q6PIJ6	1188 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	CFAP61	Q8NHU2	1237 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	KLHL6	Q8WZ60	621 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	RNF31	Q96EP0	1072 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	EBNA1BP2	Q99848	306 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	DDA1	Q9BW61	102 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	DPH1	Q9BZG8	443 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TRIT1	Q9H3H1	467 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TFB2M	Q9H5Q4	396 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TSR3	Q9UJK0	312 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	RALY	Q9UKM9	306 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	PLAGL1	Q9UM63	463 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	ICK	Q9UPZ9	632 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	TDRKH	Q9Y2W6	561 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	SNX24	Q9Y343	169 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	FAM169A	Q9Y6X4	670 aa		13.59	□□□□□ -0.23
PTPN23-205	ENST00000495653	ITPR1	Q14643	2758 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	GSAP	A4D1B5	854 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	TLCD2	A6NGC4	264 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	RAD51C	O43502	376 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	SLCO2B1	O94956	709 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	ESR1	P03372	595 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	LIPC	P11150	499 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	PKM	P14618	531 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	NELFE	P18615	380 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	ELK3	P41970	407 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	RAB15	P59190	212 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	MPP1	Q00013	466 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	PRKAA1	Q13131	559 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	SRSF6	Q13247	344 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	KCNAB1	Q14722	419 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	HSP90AA5P	Q58FG0	334 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	OTOA	Q7RTW8	1153 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	KCNMB4	Q86W47	210 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	AMIGO1	Q86WK6	493 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	SPNS2	Q8IVW8	549 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	TBC1D21	Q8IYX1	336 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	PDIK1L	Q8N165	341 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	OR5K2	Q8NHB8	316 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	UBXN4	Q92575	508 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	CFAP36	Q96G28	342 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	WDR83	Q9BRX9	315 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	ASPSCR1	Q9BZE9	553 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	B3GNT4	Q9C0J1	378 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	DPH5	Q9H2P9	285 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	FBXO8	Q9NRD0	319 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	IARS2	Q9NSE4	1012 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	INTS10	Q9NVR2	710 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	SEMA5B	Q9P283	1151 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	GALP	Q9UBC7	116 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	CIDEB	Q9UHD4	219 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	POMT2	Q9UKY4	750 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	CHMP2B	Q9UQN3	213 aa		13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	RUVBL2	Q9Y230	463 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-205	ENST00000495653	CELSR3	Q9NYQ7	3312 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653		H3BMM5	538 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	POLR1C	O15160	346 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ERVK-10	P10266	1014 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CHRM3	P20309	590 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CD82	P27701	267 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ADAR	P55265	1226 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	HIF1A	Q16665	826 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	SPANXN3	Q5MJ09	141 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	BROX	Q5VW32	411 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ZNF549	Q6P9A3	640 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CEACAM20	Q6UY09	585 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	VASH2	Q86V25	355 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ANKMY2	Q8IV38	441 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ADGRF3	Q8IZF5	1079 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CALML6	Q8TD86	181 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	ELMO2	Q96JJ3	720 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	SLC41A2	Q96JW4	573 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	OR6C1	Q96RD1	312 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CD180	Q99467	661 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	FAM167B	Q9BTA0	163 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	PLAC1	Q9HBJ0	212 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	CPNE5	Q9HCH3	593 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	POLG2	Q9UHN1	485 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	FBXO5	Q9UKT4	447 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	VPS9D1	Q9Y2B5	631 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	AHCTF1	Q8WYP5	2266 aa		13.57	□□□□□ -0.24
PTPN23-205	ENST00000495653	PTPRQ	Q9UMZ3	2332 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	FAM187A	A6NFU0	413 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653		E5RI56	91 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	STMND1	H3BQB6	276 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	SMAP	O00193	183 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	KPNA5	O15131	536 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	HAUS5	O94927	633 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	TTC4	O95801	387 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	EBLN1	P0CF75	366 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	FOLR1	P15328	257 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	CDH3	P22223	829 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	PRDX3	P30048	256 aa	Known RBP	13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	SHMT2	P34897	504 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	ARL4D	P49703	201 aa		13.56	□□□□□ -0.24
PTPN23-205	ENST00000495653	ARL4C	P56559	192 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms