RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 SERPINI1Q99574 410 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 C1orf50Q9BV19 199 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 HDAC8Q9BY41 377 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC32A1Q9H598 525 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PFDN4Q9NQP4 134 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 NMRK1Q9NWW6 199 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TNRC18O15417 2968 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ARHGEF33A8MVX0 844 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 QSOX1O00391 747 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TRIM38O00635 465 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ANKRD28O15084 1053 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PRAMEF4O60810 478 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 MMP20O60882 483 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PSIP1O75475 530 aaKnown RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 WDR47O94967 919 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 EBLN1P0CF75 366 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 LAMP2P13473 410 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 EPB42P16452 691 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PSMC3P17980 439 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ME2P23368 584 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 IL12AP29459 219 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 VHLP40337 213 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PIK3CGP48736 1102 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 UFM1P61960 85 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 AP2B1P63010 937 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 DPTQ07507 201 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 DLX2Q07687 328 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TMEM115Q12893 351 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ADAM15Q13444 863 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 CCDC6Q16204 474 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 MMEL1Q495T6 779 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 VPS26BQ4G0F5 336 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 BCL7AQ4VC05 210 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 C2orf27AQ580R0 203 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 COQ5Q5HYK3 327 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PIP5KL1Q5T9C9 394 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PRAMEF9Q5VWM5 478 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 NEK5Q6P3R8 708 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TRIM46Q7Z4K8 759 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TRIM74Q86UV6 250 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 MMAAQ8IVH4 418 aaKnown RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 KBTBD2Q8IY47 623 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TCAIMQ8N3R3 496 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TSPEARQ8WU66 669 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 SUSD6Q92537 303 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 FOXJ1Q92949 421 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 USP7Q93009 1102 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PPP2R3CQ969Q6 453 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ATP6V1E2Q96A05 226 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ROPN1LQ96C74 230 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 PPP1R16AQ96I34 528 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ANKRD27Q96NW4 1050 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 CCM2Q9BSQ5 444 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC29A3Q9BZD2 475 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TMEM45AQ9NWC5 275 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 TMEM181Q9P2C4 612 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 ANGPTL2Q9UKU9 493 aa10.38□□□□□ -0.75
PRPF4B-209ENST00000494674 CROCCQ5TZA2 2017 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 PRORSD1PA6NEY8 169 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 MANBAO00462 879 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 FFAR3O14843 346 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 GPR42O15529 346 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 SYNCRIPO60506 623 aaKnown RBP10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 ATG13O75143 517 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 BCAS2O75934 225 aaPredicted RBP10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 EPHX1P07099 455 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 HMOX2P30519 316 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 GDI1P31150 447 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 DRD3P35462 400 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 ARL1P40616 181 aaPredicted RBP10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 GRIA2P42262 883 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 PREPP48147 710 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 HNMTP50135 292 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 AP1S2P56377 157 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 YBX1P67809 324 aaKnown RBP10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 EMX2Q04743 252 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 PTCHD3Q3KNS1 767 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 GGTA1PQ4G0N0 100 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 ATP6AP1LQ52LC2 224 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 RFTN2Q52LD8 501 aaPredicted RBP10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC44A4Q53GD3 710 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 CMPK2Q5EBM0 449 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 LAYNQ6UX15 382 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC22A15Q8IZD6 547 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 FNDC5Q8NAU1 212 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 FAM156AQ8NDB6 213 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 HIPK4Q8NE63 616 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 PROKR1Q8TCW9 393 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 SLC26A7Q8TE54 656 aa10.37□□□□□ -0.75
PRPF4B-209ENST00000494674 UCMAQ8WVF2 138 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms