RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NDC80O14777 642 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 HGSO14964 777 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 THRAP10827 490 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CCL4P13236 92 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CHRM3P20309 590 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OGNP20774 298 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CCR7P32248 378 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ELK3P41970 407 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 MAGEA3P43357 314 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 RPL21P46778 160 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 LEPRP48357 1165 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ARCN1P48444 511 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 SEPHS1P49903 392 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 NFATC3Q12968 1075 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 PDIA2Q13087 525 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CTBP1Q13363 440 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 SQSTM1Q13501 440 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 TRA2AQ13595 282 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 KIF26BQ2KJY2 2108 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 HSP90AA5PQ58FG0 334 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 SPANXN3Q5MJ09 141 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 HIBCHQ6NVY1 386 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 FAM92BQ6ZTR7 304 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OTOAQ7RTW8 1153 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 PRICKLE2Q7Z3G6 844 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 TMEM135Q86UB9 458 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OOSP2Q86WS3 158 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 LRRC6Q86X45 466 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ANKMY2Q8IV38 441 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 DENND6AQ8IWF6 608 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 AGGF1Q8N302 714 aaeCLIP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OR4E2Q8NGC2 313 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 GABPB2Q8TAK5 448 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CALML6Q8TD86 181 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ASZ1Q8WWH4 475 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 LCN9Q8WX39 176 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ART4Q93070 314 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZDHHC12Q96GR4 267 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 TCF12Q99081 682 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 EBNA1BP2Q99848 306 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 KIR3DX1Q9H7L2 352 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 FBXO6Q9NRD1 293 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 IARS2Q9NSE4 1012 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 STARD5Q9NSY2 213 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 OGFRQ9NZT2 677 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZC3H7BQ9UGR2 993 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 CDC23Q9UJX2 597 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 VPS9D1Q9Y2B5 631 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 UTP11Q9Y3A2 253 aaKnown RBP10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 FAM169AQ9Y6X4 670 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 PIKFYVEQ9Y2I7 2098 aa10.14□□□□□ -0.79
TRAPPC12-222ENST00000493792 UBR5O95071 2799 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 SLC5A10A0PJK1 596 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 GSAPA4D1B5 854 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 H3BMM5 538 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 KIF2AO00139 706 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 KPNA5O15131 536 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 SUV39H1O43463 412 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 NIPSNAP2O75323 286 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 TTC4O95801 387 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ITGA2BP08514 1039 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ERVK-10P10266 1014 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 POLR2CP19387 275 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 RPS3P23396 243 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ETV5P41161 510 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 SLC1A2P43004 574 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CAPZBP47756 277 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CD151P48509 253 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ARL4DP49703 201 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 PLOD1Q02809 727 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ABRQ12979 859 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 PRKAA1Q13131 559 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CRYMQ14894 314 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 WHAMMP3Q1A5X7 153 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 TYSND1Q2T9J0 566 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ZNF789Q5FWF6 425 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 TMEM164Q5U3C3 297 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CACHD1Q5VU97 1274 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 C8orf74Q6P047 294 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 XKR5Q6UX68 686 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CENPUQ71F23 418 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CLEC14AQ86T13 490 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 CILP2Q8IUL8 1156 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 UNC5BQ8IZJ1 945 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ACVR1CQ8NER5 493 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 OR5AR1Q8NGP9 310 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 USP7Q93009 1102 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 ERP44Q9BS26 406 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 NAT9Q9BTE0 207 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 RAB17Q9H0T7 212 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 P2RY12Q9H244 342 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 TRIT1Q9H3H1 467 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 SRMSQ9H3Y6 488 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 XKR8Q9H6D3 395 aa10.13□□□□□ -0.79
TRAPPC12-222ENST00000493792 MVB12BQ9H7P6 319 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms