RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 GDE1Q9NZC3 331 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DEC1Q9P2X7 70 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 CNOT11Q9UKZ1 510 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 SERTM1A2A2V5 107 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 NPIPB8E9PQR5 432 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 WNT9AO14904 365 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GSTM1P09488 218 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 UQCRBP14927 111 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GDF5P43026 501 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 HSPA13P48723 471 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PRLHRP49683 370 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 EEFSECP57772 596 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 GSTM4Q03013 218 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 BOP1Q14137 746 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 HNRNPA1L2Q32P51 320 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 FAM78AQ5JUQ0 283 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 LCN8Q6JVE9 175 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 DET1Q7L5Y6 550 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ADGRD2Q7Z7M1 963 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 RBM23Q86U06 439 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 FAM9CQ8IZT9 166 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 OR2T34Q8NGX1 318 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 OR2T3Q8NH03 318 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ELMO1Q92556 727 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 FBXL8Q96CD0 374 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 TEX37Q96LM6 180 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 UHRF1Q96T88 793 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 CDCA3Q99618 268 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 PCDHAC1Q9H158 963 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ABCG8Q9H221 673 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 VCXQ9H320 206 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 THG1LQ9NWX6 298 aaKnown RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 AP4S1Q9Y587 144 aa10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 MUC22E2RYF6 1773 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-204ENST00000493669 ASPDHA6ND91 283 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 FADS2P1A8MWK0 482 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 LOC730098B7Z3J9 87 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ANKRD28O15084 1053 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ATG13O75143 517 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 PRPH2P23942 346 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 FSHRP23945 695 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 VIPR2P41587 438 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 GNPDA1P46926 289 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 CCR3P51677 355 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 GRAMD1BQ3KR37 738 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 SFT2D3Q587I9 215 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 IL23RQ5VWK5 629 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 TICAM1Q8IUC6 712 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 KLHDC8AQ8IYD2 350 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 L3MBTL4Q8NA19 623 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 GATA6Q92908 595 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM125Q96AQ2 219 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 DTD2Q96FN9 168 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 PPP1R16AQ96I34 528 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 COQ10AQ96MF6 247 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ZBTB18Q99592 522 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC39A3Q9BRY0 314 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ACTR8Q9H981 624 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 CMTM6Q9NX76 183 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ACTR3BQ9P1U1 418 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 KLQ9UEF7 1012 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 SNX6Q9UNH7 406 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 UGDHO60701 494 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 G6PDP11413 515 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ACPPP15309 386 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 IL12AP29459 219 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ELAVL3Q14576 367 aaKnown RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 GAB4Q2WGN9 574 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 FNDC3BQ53EP0 1204 aaKnown RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 CACHD1Q5VU97 1274 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 TMC5Q6UXY8 1006 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 PTRH1Q86Y79 214 aaKnown RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 SKA2Q8WVK7 121 aaPredicted RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ATL1Q8WXF7 558 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 AP2M1Q96CW1 435 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 COPS7BQ9H9Q2 264 aaPredicted RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ARMC1Q9NVT9 282 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 ZNF490Q9ULM2 529 aaPredicted RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 RNF11Q9Y3C5 154 aa10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
PHACTR4-204ENST00000493669 H0YJX3 145 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 KPNA3O00505 521 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 EPORP19235 508 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 VARSP26640 1264 aaKnown RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 AQP4P55087 323 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 CREB5Q02930 508 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 ACOX1Q15067 660 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 IMPG1Q17R60 797 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 TIGD2Q4W5G0 525 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 SERPINA13PQ6UXR4 307 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 MBOAT1Q6ZNC8 495 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 VRK3Q8IV63 474 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PIP4K2CQ8TBX8 421 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 PKP2Q99959 881 aa10.54□□□□□ -0.72
PHACTR4-204ENST00000493669 CCM2Q9BSQ5 444 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms