RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	PMS2	P54278	862 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	CFHR1	Q03591	330 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	6e-7	■■■■■ 31.8
AGAP3-223	ENST00000492234	UBAP2	Q5T6F2	1119 aa	Known RBP	12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	GRTP1	Q5TC63	336 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	PAQR3	Q6TCH7	311 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	UNC5D	Q6UXZ4	953 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	CPNE9	Q8IYJ1	553 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	OR5K2	Q8NHB8	316 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	GIMAP7	Q8NHV1	300 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	CD200R1	Q8TD46	325 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	TMEM74	Q96NL1	305 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	TGM7	Q96PF1	710 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	CYTH2	Q99418	400 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	DPYSL5	Q9BPU6	564 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	STRADB	Q9C0K7	418 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	SEMA6C	Q9H3T2	930 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	SRMS	Q9H3Y6	488 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	RHOJ	Q9H4E5	214 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	EPB41L1	Q9H4G0	881 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	XKR8	Q9H6D3	395 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	KLHL3	Q9UH77	587 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	SLC39A10	Q9ULF5	831 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	PLAGL1	Q9UM63	463 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	RUVBL2	Q9Y230	463 aa	Known RBP	12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	MED16	Q9Y2X0	877 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	MTO1	Q9Y2Z2	717 aa	Known RBP	12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	NFS1	Q9Y697	457 aa		12.8	□□□□□ -0.36
AGAP3-223	ENST00000492234	ANKRD12	Q6UB98	2062 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	SPEG	Q15772	3267 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	KIF26B	Q2KJY2	2108 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234		A0A087WUV0	522 aa	Predicted RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TMX2-CTNND1	H3BSU7	103 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	KDM1A	O60341	852 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	CBSL	P0DN79	551 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	ATP5D	P30049	168 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	CBS	P35520	551 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	PGGT1B	P53609	377 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	INHBC	P55103	352 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	ILF2	Q12905	390 aa	Known RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	NAB1	Q13506	487 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	CLPP	Q16740	277 aa	Predicted RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	ISX	Q2M1V0	245 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	ERCC6L	Q2NKX8	1250 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	IRGC	Q6NXR0	463 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TMEM71	Q6P5X7	295 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	KLHL35	Q6PF15	583 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	FOXR1	Q6PIV2	292 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TMPRSS9	Q7Z410	1059 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	B3GNT8	Q7Z7M8	397 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	OOSP2	Q86WS3	158 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	PLXDC1	Q8IUK5	500 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	DCBLD1	Q8N8Z6	715 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	EIF1AD	Q8N9N8	165 aa	Known RBP	12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	OR52E1	Q8NGJ3	308 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	EEF1AKMT1	Q8WVE0	214 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	RSC1A1	Q92681	617 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	VPS39	Q96JC1	886 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	RBBP8	Q99708	897 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	OLFM1	Q99784	485 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	HRASLS2	Q9NWW9	162 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	TMEM9	Q9P0T7	183 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	CIDEB	Q9UHD4	219 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	IKBKG	Q9Y6K9	419 aa		12.79	□□□□□ -0.36
AGAP3-223	ENST00000492234	POC1B-GALNT4	F8VUJ3	575 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	CAPN5	O15484	640 aa	Predicted RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	C1orf105	O95561	183 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	MPC1L	P0DKB6	136 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	MYBL2	P10244	700 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	ENO3	P13929	434 aa	Predicted RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	POLR2C	P19387	275 aa	Predicted RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	FDXR	P22570	491 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	MAP4	P27816	1152 aa	Known RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	TNFRSF8	P28908	595 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	CSF2RB	P32927	897 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	BDKRB1	P46663	353 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	LIMK2	P53671	638 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	TAS2R39	P59534	338 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	IL2	P60568	153 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	POU4F1	Q01851	419 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	PRKAA1	Q13131	559 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	SQSTM1	Q13501	440 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	GBX1	Q14549	363 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	USP10	Q14694	798 aa	Known RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	WDR74	Q6RFH5	385 aa	Predicted RBP	12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	NEK10	Q6ZWH5	1172 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	AMIGO1	Q86WK6	493 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	DCUN1D3	Q8IWE4	304 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	CACTIN-AS1	Q8N1I8	211 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	MYO1H	Q8N1T3	1032 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	OR4D9	Q8NGE8	314 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	MAGEC3	Q8TD91	643 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	LINGO1	Q96FE5	620 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	ZDHHC12	Q96GR4	267 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	NRTN	Q99748	197 aa		12.78	□□□□□ -0.36
AGAP3-223	ENST00000492234	TFB2M	Q9H5Q4	396 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms