RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 LAMP2P13473 410 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 TM4SF1P30408 202 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 HADHAP40939 763 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 KCNC3Q14003 757 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 KRT33BQ14525 404 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 KIAA0930Q6ICG6 404 aaPredicted RBP3.82□□□□□ -1.8
NF1-214ENST00000490416 LINGO4Q6UY18 593 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 IKBIPQ70UQ0 350 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 ZNF300Q96RE9 604 aaPredicted RBP3.82□□□□□ -1.8
NF1-214ENST00000490416 GHITMQ9H3K2 345 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 CHMP1AQ9HD42 196 aaPredicted RBP3.82□□□□□ -1.8
NF1-214ENST00000490416 SEPT11Q9NVA2 429 aaKnown RBP3.82□□□□□ -1.8
NF1-214ENST00000490416 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 TAS2R14Q9NYV8 317 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 FBXL17Q9UF56 701 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 ZHX2Q9Y6X8 837 aa3.82□□□□□ -1.8
NF1-214ENST00000490416 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 LOC101059948A0A1B0GTJ6 334 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 A6NCN8 305 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.81□□□□□ -1.8
NF1-214ENST00000490416 TO15178 435 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 GJB3O75712 270 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 RB1P06400 928 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 NKX2-1P43699 371 aaPredicted RBP3.81□□□□□ -1.8
NF1-214ENST00000490416 CDH8P55286 799 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 MAMLD1Q13495 774 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 SNAI3Q3KNW1 292 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 FASTKD1Q53R41 847 aaKnown RBP3.81□□□□□ -1.8
NF1-214ENST00000490416 MZT2BQ6NZ67 158 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 CFAP161Q6P656 301 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 PIGZQ86VD9 579 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 MARVELD2Q8N4S9 558 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 WDTC1Q8N5D0 677 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 NIPA2Q8N8Q9 360 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 SCFD2Q8WU76 684 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 DYRK2Q92630 601 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 PKP2Q99959 881 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 FUCA2Q9BTY2 467 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 KRT84Q9NSB2 600 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 LRWD1Q9UFC0 647 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 OSGIN1Q9UJX0 560 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 EXO1Q9UQ84 846 aaKnown RBP3.81□□□□□ -1.8
NF1-214ENST00000490416 MOB4Q9Y3A3 225 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 RIPK3Q9Y572 518 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.81□□□□□ -1.8
NF1-214ENST00000490416 LYVE1Q9Y5Y7 322 aa3.81□□□□□ -1.8
NF1-214ENST00000490416 RSF1Q96T23 1441 aaPredicted RBP3.81□□□□□ -1.8
NF1-214ENST00000490416 FSD2A1L4K1 749 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 KHDRBS3O75525 346 aaKnown RBP3.8□□□□□ -1.8
NF1-214ENST00000490416 NXPH2O95156 264 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 OR2C1O95371 312 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 DUS4LO95620 317 aaKnown RBP3.8□□□□□ -1.8
NF1-214ENST00000490416 CLTBP09497 229 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 CA4P22748 312 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 CA6P23280 308 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 SHC1P29353 583 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 HOXD13P35453 343 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 GARSP41250 739 aaKnown RBP3.8□□□□□ -1.8
NF1-214ENST00000490416 CX3CL1P78423 397 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 ENPP2Q13822 863 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 MELKQ14680 651 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 MEA1Q16626 185 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 MDH1BQ5I0G3 518 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 WLSQ5T9L3 541 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 C16orf54Q6UWD8 224 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 INTS8Q75QN2 995 aaKnown RBP3.8□□□□□ -1.8
NF1-214ENST00000490416 CHST9Q7L1S5 443 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 LRRTM1Q86UE6 522 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 AMER3Q8N944 861 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 OR4C3Q8NH37 302 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 RNF128Q8TEB7 428 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 ERLEC1Q96DZ1 483 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 A4GALTQ9NPC4 353 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 ZDHHC2Q9UIJ5 367 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 WDR37Q9Y2I8 494 aa3.8□□□□□ -1.8
NF1-214ENST00000490416 SOS1Q07889 1333 aaPredicted RBP3.8□□□□□ -1.8
NF1-214ENST00000490416 SSX4O60224 188 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 SCGB1D1O95968 90 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 ACADSP16219 412 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 PRLRP16471 622 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 GABRB1P18505 474 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 CCR10P46092 362 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 PDX1P52945 283 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 HERV-K104P61576 105 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 HLA-BQ31612 363 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 FAM98BQ52LJ0 330 aaKnown RBP3.79□□□□□ -1.8
NF1-214ENST00000490416 GRTP1Q5TC63 336 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 WDR78Q5VTH9 848 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 C4orf50Q6ZRC1 276 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 PCGF5Q86SE9 256 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 PIGQQ9BRB3 760 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 VN1R1Q9GZP7 353 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 CCDC177Q9NQR7 707 aaPredicted RBP3.79□□□□□ -1.8
NF1-214ENST00000490416 TAB2Q9NYJ8 693 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 ERAP1Q9NZ08 941 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 TBC1D29Q9UFV1 150 aa3.79□□□□□ -1.8
NF1-214ENST00000490416 LRRC72A6NJI9 287 aa3.78□□□□□ -1.8
NF1-214ENST00000490416 AGAP14A8MT82 685 aa3.78□□□□□ -1.8
NF1-214ENST00000490416 KPNA7A9QM74 516 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms