RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 TSPY3P0CV98 308 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TSPY8P0CW00 308 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 EPHA2P29317 976 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 PCGF2P35227 344 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 RAB28P51157 221 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TSPY1Q01534 308 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ARL16Q0P5N6 197 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ILF3Q12906 894 aaKnown RBP eCLIP3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 MFAP5Q13361 173 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 KIR2DS3Q14952 304 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ZNF628Q5EBL2 1059 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ARMC4Q5T2S8 1044 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 CST9LP1Q5W188 147 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 KRT39Q6A163 491 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TMPRSS11FQ6ZWK6 438 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ZNF771Q7L3S4 317 aaPredicted RBP3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 CHST3Q7LGC8 479 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 SLC24A4Q8NFF2 622 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 RNF128Q8TEB7 428 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 MRPS27Q92552 414 aaKnown RBP3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 VPS33AQ96AX1 596 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 HDAC11Q96DB2 347 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ST6GAL2Q96JF0 529 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 C17orf77Q96MU5 243 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 SFXN2Q96NB2 322 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TRAF4Q9BUZ4 470 aaPredicted RBP3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TRMT61BQ9BVS5 477 aaKnown RBP3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ANKZF1Q9H8Y5 726 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 ACKR4Q9NPB9 350 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TCF7L2Q9NQB0 619 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 FAM118AQ9NWS6 357 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 CHD6Q8TD26 2715 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 PTPN13Q12923 2485 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 GPR179Q6PRD1 2367 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 CHD4Q14839 1912 aa3.31□□□□□ -1.88
AC055855.1-201ENST00000489563 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 A0A1W2PRB8 838 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 A8MXE2 369 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PRR32B1ATL7 298 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 H7C0S8 307 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 SPRY1O43609 319 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 FGF17O60258 216 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CAVIN2O95810 425 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 NR3C1P04150 777 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ERCC2P18074 760 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 MSH3P20585 1137 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 MARK3P27448 753 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 MTHFRP42898 656 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 THOP1P52888 689 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PNRC1Q12796 327 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 HNRNPA0Q13151 305 aaKnown RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PTPRCAPQ14761 206 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PSMD6Q15008 389 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 TNIP1Q15025 636 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ZRSR1Q15695 479 aaKnown RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 FAM76BQ5HYJ3 339 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 GRTP1Q5TC63 336 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 NR2C2APQ86WQ0 139 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CFAP206Q8IYR0 622 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 SLC4A11Q8NBS3 891 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ZNF473Q8WTR7 871 aaKnown RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ATL1Q8WXF7 558 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 STAMBPL1Q96FJ0 436 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 SCRN2Q96FV2 425 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 LINC00615Q96LM1 132 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CFAP57Q96MR6 1250 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 BTBD10Q9BSF8 475 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 NUP85Q9BW27 656 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 TFB2MQ9H5Q4 396 aaKnown RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ERVMER34-1Q9H9K5 563 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ZBTB20Q9HC78 741 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ZFP57Q9NU63 452 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PRMT7Q9NVM4 692 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 C5AR2Q9P296 337 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 GIMAP2Q9UG22 337 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ICAM5Q9UMF0 924 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 PADI2Q9Y2J8 665 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 CCL27Q9Y4X3 112 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 NME7Q9Y5B8 376 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 RPS6KL1Q9Y6S9 549 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 ZFHX4Q86UP3 3567 aa3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 GREB1LQ9C091 1923 aaPredicted RBP3.3□□□□□ -1.88
AC055855.1-201ENST00000489563 WDR62O43379 1518 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 SCN5AQ14524 2016 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 OR6C76A6NM76 312 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 PRSS44E7EML9 344 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 LMX1BO60663 402 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 TOMM70O94826 608 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 SLCO2B1O94956 709 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 FYNP06241 537 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 CCDC175P0C221 793 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 DANCRP0C864 163 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 GNAZP19086 355 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 RAD23AP54725 363 aa3.29□□□□□ -1.88
AC055855.1-201ENST00000489563 CDH11P55287 796 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms