RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PCDHGA6Q9Y5G7 932 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 KCNMB2Q9Y691 235 aa11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
CCHCR1-215ENST00000488920 C2orf74A8MZ97 194 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 C21orf140B9A014 251 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 TMEM150CB9EJG8 249 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 QSOX1O00391 747 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 MAP3K7O43318 606 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 CPNE3O75131 537 aaKnown RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 OR56A5P0C7T3 313 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 ACADLP28330 430 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 PTPN4P29074 926 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 CSE1LP55060 971 aaKnown RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 RPS18P62269 152 aaKnown RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 GPS2Q13227 327 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 SYTL3Q4VX76 610 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 LCN10Q6JVE6 187 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 AFTPHQ6ULP2 937 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 UNC5AQ6ZN44 842 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF534Q76KX8 674 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 OR4L1Q8NH43 312 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 OR1L3Q8NH93 324 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 TRAPPC9Q96Q05 1148 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 TTC1Q99614 292 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 CLMPQ9H6B4 373 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 FANCEQ9HB96 536 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 CHRAC1Q9NRG0 131 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 RIMKLBQ9ULI2 386 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 ICKQ9UPZ9 632 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 POLHQ9Y253 713 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 DRG1Q9Y295 367 aaKnown RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 TCAF1Q9Y4C2 921 aa11.57□□□□□ -0.56
CCHCR1-215ENST00000488920 SLC5A10A0PJK1 596 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 IQCF5A8MTL0 148 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 K7EM74 188 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 MEN1O00255 615 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 FGGP02679 453 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 KLK3P07288 261 aaPredicted RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 CCDC175P0C221 793 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 TPBGLP0DKB5 382 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 CCR7P32248 378 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 KCNJ1P48048 391 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 RPS15P62841 145 aaKnown RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 PRAMEP78395 509 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 CRADDP78560 199 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 ACVR1Q04771 509 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 ABRQ12979 859 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 FASTKD1Q53R41 847 aaKnown RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 COLEC12Q5KU26 742 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 PLEKHS1Q5SXH7 462 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 NLRP9Q7RTR0 991 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 GSTA5Q7RTV2 222 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 TRIM73Q86UV7 250 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 HOOK3Q86VS8 718 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 TBC1D21Q8IYX1 336 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 PPHLN1Q8NEY8 458 aaKnown RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 CLIP3Q96DZ5 547 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 PITPNM3Q9BZ71 974 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 CHST8Q9H2A9 424 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF106Q9H2Y7 1883 aaKnown RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 SPHK1Q9NYA1 384 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 MARCH4Q9P2E8 410 aaPredicted RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 SERTAD3Q9UJW9 196 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 PLAGL1Q9UM63 463 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 FARSAQ9Y285 508 aaKnown RBP11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 BSNQ9UPA5 3926 aa11.56□□□□□ -0.56
CCHCR1-215ENST00000488920 TLN1Q9Y490 2541 aaKnown RBP11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CEP104O60308 925 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 RECKO95980 971 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CHRM5P08912 532 aaPredicted RBP11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 UGT2B7P16662 529 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 NR1D1P20393 614 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CYP2A7P20853 494 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CXCR5P32302 372 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 SHMT2P34897 504 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CSRP3P50461 194 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 BASP1P80723 227 aaKnown RBP11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 TLE1Q04724 770 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 HSPA14Q0VDF9 509 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 LACTB2Q53H82 288 aaPredicted RBP11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF789Q5FWF6 425 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 PCID2Q5JVF3 399 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 FAM69BQ5VUD6 431 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 DRICH1Q6PGQ1 229 aaPredicted RBP11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 SPESP1Q6UW49 350 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF662Q6ZS27 426 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CDHR3Q6ZTQ4 885 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 VRK3Q8IV63 474 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 LRRC8AQ8IWT6 810 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 OR5K2Q8NHB8 316 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 LKAAEAR1Q8TD35 194 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CPT1BQ92523 772 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 OR2A14Q96R47 310 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 SYTL2Q9HCH5 934 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms