RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
TTC3-221ENST00000488522 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
TTC3-221ENST00000488522 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
TTC3-221ENST00000488522 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
TTC3-221ENST00000488522 HEBP2Q9Y5Z4 205 aa11.91□□□□□ -0.5
TTC3-221ENST00000488522 CFAP20Q9Y6A4 193 aaKnown RBP11.91□□□□□ -0.5
TTC3-221ENST00000488522 COLEC10Q9Y6Z7 277 aa11.91□□□□□ -0.5
TTC3-221ENST00000488522 PIKFYVEQ9Y2I7 2098 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 APCP25054 2843 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 SLC9B1P1A6NJY1 282 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 H3BMH7 237 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 APOC4-APOC2K7ER74 178 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 KLF7O75840 302 aaPredicted RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 APOC2P02655 101 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 SLC35G4P0C7Q5 338 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 PECAM1P16284 738 aaPredicted RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 CASQ1P31415 396 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 DCTP40126 519 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 HADHAP40939 763 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 SOX8P57073 446 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 MPP3Q13368 585 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 FNBP1LQ5T0N5 605 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 PRAMEF17Q5VTA0 474 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 ARMC6Q6NXE6 501 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 MRGPREQ86SM8 312 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 SLC13A5Q86YT5 568 aaPredicted RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 ACVR1CQ8NER5 493 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 HM13Q8TCT9 377 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 TFB1MQ8WVM0 346 aaKnown RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 PBKQ96KB5 322 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 CCM2Q9BSQ5 444 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 CHRNA10Q9GZZ6 450 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
TTC3-221ENST00000488522 PKP3Q9Y446 797 aa11.9□□□□□ -0.5
TTC3-221ENST00000488522 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.51
TTC3-221ENST00000488522 NUP210LQ5VU65 1888 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 A1L4Q6 167 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 CES2O00748 559 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 KLHL41O60662 606 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 PRAMEF1O95521 474 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 FGGP02679 453 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 HBQ1P09105 142 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 ST6GAL1P15907 406 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 POLR2CP19387 275 aaPredicted RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 MSH3P20585 1137 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 CYP2A7P20853 494 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 CDH3P22223 829 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 PRDX3P30048 256 aaKnown RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 AKT1P31749 480 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 PRLHRP49683 370 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 OTUD4Q01804 1114 aaKnown RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 PRKAA1Q13131 559 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 FBXO38Q6PIJ6 1188 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 ZNF567Q8N184 647 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 ZNF398Q8TD17 642 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 BLOC1S5Q8TDH9 187 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 CLIP3Q96DZ5 547 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 C17orf62Q9BQA9 187 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 TFB2MQ9H5Q4 396 aaKnown RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 SAE1Q9UBE0 346 aaPredicted RBP11.89□□□□□ -0.51
TTC3-221ENST00000488522 B3GNT3Q9Y2A9 372 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 PADI2Q9Y2J8 665 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 ANKRD12Q6UB98 2062 aa11.89□□□□□ -0.51
TTC3-221ENST00000488522 TCRBV7S2A1N4TA0A589 114 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 TMEM150CB9EJG8 249 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 BTN3A1O00481 513 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 ZNF185O15231 689 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 STX7O15400 261 aaKnown RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 SRP72O76094 671 aaKnown RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 IGHEP01854 428 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 TUBB4AP04350 444 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 PREPP48147 710 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 CD151P48509 253 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 XIAPP98170 497 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 MYBPC3Q14896 1274 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 TAF1AQ15573 450 aaPredicted RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 FAM69BQ5VUD6 431 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 B4GALNT4Q76KP1 1039 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 ZC3H18Q86VM9 953 aaKnown RBP11.88□□□□□ -0.51
TTC3-221ENST00000488522 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 ACTL9Q8TC94 416 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 COG1Q8WTW3 980 aa11.88□□□□□ -0.51
TTC3-221ENST00000488522 MAIP1Q8WWC4 291 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms