RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 KIF5CO60282 957 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TMEM63AO94886 807 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 PRKAR1AP10644 381 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 ARNTP27540 789 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 CCR7P32248 378 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 MAGEA6P43360 314 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TUBB4BP68371 445 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TBR1Q16650 682 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 CYP1B1Q16678 543 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 CES3Q6UWW8 571 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 KRT222Q8N1A0 295 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 MPP5Q8N3R9 675 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 STARD8Q92502 1023 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 MFSD3Q96ES6 412 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 MED8Q96G25 268 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 OSBPL9Q96SU4 736 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 EFHD1Q9BUP0 239 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 KIFC1Q9BW19 673 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 MRM3Q9HC36 420 aaKnown RBP17.22■□□□□ 0.35
ITGB1-215ENST00000488494 CROTQ9UKG9 612 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 BTRCQ9Y297 605 aa17.22■□□□□ 0.35
ITGB1-215ENST00000488494 TDRKHQ9Y2W6 561 aaKnown RBP17.22■□□□□ 0.35
ITGB1-215ENST00000488494 FASNP49327 2511 aaKnown RBP17.22■□□□□ 0.35
ITGB1-215ENST00000488494 BAHCC1Q9P281 2608 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 C2orf74A8MZ97 194 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 AVILO75366 819 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 VAPBO95292 243 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 PRDX3P30048 256 aaKnown RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 SHMT2P34897 504 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 DLSTP36957 453 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 COILP38432 576 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 PLOD1Q02809 727 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 HSPA14Q0VDF9 509 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 CDC20Q12834 499 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 TMED2Q15363 201 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 TMTC4Q5T4D3 741 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 CCDC137Q6PK04 289 aaKnown RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 VRK3Q8IV63 474 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 SLC22A15Q8IZD6 547 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 ADGRF3Q8IZF5 1079 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 EXD3Q8N9H8 876 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 OR5K2Q8NHB8 316 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 PITPNM3Q9BZ71 974 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 KLHL25Q9H0H3 589 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 C1GALT1Q9NS00 363 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 ACTR10Q9NZ32 417 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 GNPTGQ9UJJ9 305 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 PLAGL1Q9UM63 463 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 SNX12Q9UMY4 172 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 SOX13Q9UN79 622 aa17.21■□□□□ 0.35
ITGB1-215ENST00000488494 MRPS18BQ9Y676 258 aaKnown RBP17.21■□□□□ 0.35
ITGB1-215ENST00000488494 GOLGA6L10A0A0M3HER8 536 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 GOLGA8KD6RF30 607 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 GOLGA8TH3BQL2 631 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 NKX2-8O15522 239 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 PHF2O75151 1096 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 NDUFS3O75489 264 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 APOA4P06727 396 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 PVRP15151 417 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 ST6GAL1P15907 406 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 SARNPP82979 210 aaKnown RBP17.2■□□□□ 0.34
ITGB1-215ENST00000488494 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
ITGB1-215ENST00000488494 PTRHD1Q6GMV3 140 aaKnown RBP17.2■□□□□ 0.34
ITGB1-215ENST00000488494 CASC4Q6P4E1 433 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 TRIM73Q86UV7 250 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 TMEM126BQ8IUX1 230 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 TBC1D21Q8IYX1 336 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 ACTRT1Q8TDG2 376 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 CPT1BQ92523 772 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 ZNF501Q96CX3 271 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-215ENST00000488494 TRIM56Q9BRZ2 755 aaKnown RBP17.2■□□□□ 0.34
ITGB1-215ENST00000488494 P2RY12Q9H244 342 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 FANCEQ9HB96 536 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 SAMD15Q9P1V8 674 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 POLG2Q9UHN1 485 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 CDYLQ9Y232 598 aa17.2■□□□□ 0.34
ITGB1-215ENST00000488494 PIPSLA2A3N6 862 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 USP27XA6NNY8 438 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 GOLGA8MH3BSY2 632 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 ZNF185O15231 689 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 SCRG1O75711 98 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 MT-ND3P03897 115 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 NTRK1P04629 796 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 TPBGLP0DKB5 382 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 UGT2B7P16662 529 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 F8A1P23610 371 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 OAS2P29728 719 aaKnown RBP17.19■□□□□ 0.34
ITGB1-215ENST00000488494 FNTAP49354 379 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 EIF3BP55884 814 aaKnown RBP17.19■□□□□ 0.34
ITGB1-215ENST00000488494 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 KIAA0930Q6ICG6 404 aaPredicted RBP17.19■□□□□ 0.34
ITGB1-215ENST00000488494 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 BORAQ6PGQ7 559 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 SPESP1Q6UW49 350 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 UNC5AQ6ZN44 842 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 CAND1Q86VP6 1230 aaKnown RBP17.19■□□□□ 0.34
ITGB1-215ENST00000488494 BPHLQ86WA6 291 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms