RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 SARM1Q6SZW1 724 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 RAD9BQ6WBX8 426 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 CHST15Q7LFX5 561 aaPredicted RBP5.84□□□□□ -1.47
CDHR3-213ENST00000488386 SPRED1Q7Z699 444 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 CNGA4Q8IV77 575 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 CCDC50Q8IVM0 306 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 RHOT2Q8IXI1 618 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 RHOT1Q8IXI2 618 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 FBXO39Q8N4B4 442 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 ARL14Q8N4G2 192 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 SLC25A41Q8N5S1 370 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 GPR26Q8NDV2 337 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 ATL2Q8NHH9 583 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 JPH3Q8WXH2 748 aaPredicted RBP5.84□□□□□ -1.47
CDHR3-213ENST00000488386 NAT6Q93015 286 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 TBATAQ96M53 351 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 NUDT22Q9BRQ3 303 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 MLPHQ9BV36 600 aaPredicted RBP5.84□□□□□ -1.47
CDHR3-213ENST00000488386 POLR1BQ9H9Y6 1135 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 USP29Q9HBJ7 922 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 TRIM10Q9UDY6 481 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 PISDQ9UG56 409 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 ZNHIT2Q9UHR6 403 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 SLC17A4Q9Y2C5 497 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
CDHR3-213ENST00000488386 ZNF711Q9Y462 761 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 LOXL2Q9Y4K0 774 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 ALG6Q9Y672 507 aa5.84□□□□□ -1.47
CDHR3-213ENST00000488386 BPTFQ12830 3046 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 hCG_1818297A0A087WSY0 165 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 CCDC187A0A096LP49 1063 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PRAMEF33A0A0G2JMD5 474 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 A0A1W2PQ67 120 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 MACROD2A1Z1Q3 448 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 RHPN2P1A8MT19 583 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 A8MU76 341 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ANKRD66B4E2M5 251 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PSMD11O00231 422 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 RRP8O43159 456 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 DNAJC6O75061 913 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 HOXC4P09017 264 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 CCL4P13236 92 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ZNF8P17098 575 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 RBMS1P29558 406 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 CSF2RBP32927 897 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 UGT1A5P35504 534 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ARHGAP25P42331 645 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 MAPK9P45984 424 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 SPINT3P49223 89 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 INHBCP55103 352 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NAP1L1P55209 391 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 CFHR1Q03591 330 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 WASHC5Q12768 1159 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ILF3Q12906 894 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NFATC2Q13469 925 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 C16orf72Q14CZ0 275 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PDK1Q15118 436 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PRKD1Q15139 912 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 SEPT7Q16181 437 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 MAP9Q49MG5 647 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 KHDC1Q4VXA5 237 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PYCR3Q53H96 274 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PRR31Q5SQ13 230 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 KIAA1614Q5VZ46 1190 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 LVRNQ6Q4G3 990 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PCSK4Q6UW60 755 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 RAB11FIP2Q7L804 512 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NT5DC3Q86UY8 548 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ZFAND4Q86XD8 727 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 GALNT13Q8IUC8 556 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 LRRC49Q8IUZ0 686 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NLGN4XQ8N0W4 816 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NDUFAF2Q8N183 169 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 DTX3Q8N9I9 347 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 LINC01356Q8N9X3 169 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 SPC24Q8NBT2 197 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 IPMKQ8NFU5 416 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 WDR36Q8NI36 951 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 KCNE4Q8WWG9 221 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 IMP4Q96G21 291 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 COX14Q96I36 57 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 HIC2Q96JB3 615 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 ZNF578Q96N58 590 aaPredicted RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 SLC46A1Q96NT5 459 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 OR2M4Q96R27 311 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 TRIB3Q96RU7 358 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 APOL2Q9BQE5 337 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 SPATA16Q9BXB7 569 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 GSDMCQ9BYG8 508 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 OR2AG1Q9H205 316 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PRORYQ9H606 182 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 GLOD4Q9HC38 313 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 INTS7Q9NVH2 962 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 DDX56Q9NY93 547 aaKnown RBP5.83□□□□□ -1.48
CDHR3-213ENST00000488386 PKD2L2Q9NZM6 624 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 NCKIPSDQ9NZQ3 722 aa5.83□□□□□ -1.48
CDHR3-213ENST00000488386 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms