RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PGGT1BP53609 377 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 TIAL1Q01085 375 aaKnown RBP eCLIP19.04■□□□□ 0.64
SEC22A-208ENST00000487572 GBX1Q14549 363 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 SLMAPQ14BN4 828 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 KLHL38Q2WGJ6 581 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 FAM153CQ494X1 144 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 FAM45BPQ6NSW5 357 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 UGT3A1Q6NUS8 523 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 UNC5DQ6UXZ4 953 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 CCNI2Q6ZMN8 369 aaPredicted RBP19.04■□□□□ 0.64
SEC22A-208ENST00000487572 ZNF574Q6ZN55 896 aaPredicted RBP19.04■□□□□ 0.64
SEC22A-208ENST00000487572 CPNE9Q8IYJ1 553 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 TBC1D21Q8IYX1 336 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 OR5K2Q8NHB8 316 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 FAM45AQ8TCE6 357 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 VPS39Q96JC1 886 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 FOPNLQ96NB1 174 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 TMEM74Q96NL1 305 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 OLFM1Q99784 485 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 CPNE1Q99829 537 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 SRMSQ9H3Y6 488 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 RHOJQ9H4E5 214 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 XKR8Q9H6D3 395 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.04■□□□□ 0.64
SEC22A-208ENST00000487572 ENTPD2Q9Y5L3 495 aa19.04■□□□□ 0.64
SEC22A-208ENST00000487572 V9GYY5 206 aaPredicted RBP19.04■□□□□ 0.64
SEC22A-208ENST00000487572 COL27A1Q8IZC6 1860 aaPredicted RBP19.03■□□□□ 0.64
SEC22A-208ENST00000487572 IGHV5-10-1A0A0J9YXX1 117 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 OR6C74A6NCV1 312 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 RPN2P04844 631 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 MYBL2P10244 700 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 FDXRP22570 491 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 BDKRB1P46663 353 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 GFERP55789 205 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 PDAP1Q13442 181 aaKnown RBP19.03■□□□□ 0.64
SEC22A-208ENST00000487572 SQSTM1Q13501 440 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 CLPPQ16740 277 aaPredicted RBP19.03■□□□□ 0.64
SEC22A-208ENST00000487572 IRGCQ6NXR0 463 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 TMEM71Q6P5X7 295 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 KLHL35Q6PF15 583 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 WDR74Q6RFH5 385 aaPredicted RBP19.03■□□□□ 0.64
SEC22A-208ENST00000487572 SLITRK4Q8IW52 837 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 CACTIN-AS1Q8N1I8 211 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 OR4D9Q8NGE8 314 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 UHMK1Q8TAS1 419 aaKnown RBP19.03■□□□□ 0.64
SEC22A-208ENST00000487572 CCDC74BQ96LY2 380 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 TGM7Q96PF1 710 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 DPYSL5Q9BPU6 564 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 STRADBQ9C0K7 418 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 ANKZF1Q9H8Y5 726 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 KLHL42Q9P2K6 505 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 POLG2Q9UHN1 485 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 VWA7Q9Y334 891 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 MSRB2Q9Y3D2 182 aa19.03■□□□□ 0.64
SEC22A-208ENST00000487572 A8MU76 341 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 CAPN5O15484 640 aaPredicted RBP19.02■□□□□ 0.64
SEC22A-208ENST00000487572 FAM155BO75949 473 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 GP5P40197 560 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 SKIV2L2P42285 1042 aaKnown RBP19.02■□□□□ 0.64
SEC22A-208ENST00000487572 PPP1CAP62136 330 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 SHC2P98077 582 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 ARMC6Q6NXE6 501 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 FOXR1Q6PIV2 292 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 PAQR3Q6TCH7 311 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 PIWIL4Q7Z3Z4 852 aaKnown RBP19.02■□□□□ 0.64
SEC22A-208ENST00000487572 OOSP2Q86WS3 158 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 PLXDC1Q8IUK5 500 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 DCUN1D3Q8IWE4 304 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 RCBTB1Q8NDN9 531 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 RBBP8Q99708 897 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 HRASLS2Q9NWW9 162 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 ICKQ9UPZ9 632 aa19.02■□□□□ 0.64
SEC22A-208ENST00000487572 MTO1Q9Y2Z2 717 aaKnown RBP19.02■□□□□ 0.64
SEC22A-208ENST00000487572 FAM221BA6H8Z2 402 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 OR5K3A6NET4 321 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 TMX2-CTNND1H3BSU7 103 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 CBSLP0DN79 551 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 ENO3P13929 434 aaPredicted RBP19.01■□□□□ 0.63
SEC22A-208ENST00000487572 POLR2CP19387 275 aaPredicted RBP19.01■□□□□ 0.63
SEC22A-208ENST00000487572 CCKBRP32239 447 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 CBSP35520 551 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 LIMK2P53671 638 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 ZFP36L1Q07352 338 aaKnown RBP19.01■□□□□ 0.63
SEC22A-208ENST00000487572 NAB1Q13506 487 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 UAP1Q16222 522 aaPredicted RBP19.01■□□□□ 0.63
SEC22A-208ENST00000487572 TTC23LQ6PF05 361 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 FAM92BQ6ZTR7 304 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 AMIGO1Q86WK6 493 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 EEF1AKMT1Q8WVE0 214 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 CYTH2Q99418 400 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 MCMBPQ9BTE3 642 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 TFB2MQ9H5Q4 396 aaKnown RBP19.01■□□□□ 0.63
SEC22A-208ENST00000487572 ACSS3Q9H6R3 686 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 SLC39A10Q9ULF5 831 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 NCOR2Q9Y618 2525 aa19.01■□□□□ 0.63
SEC22A-208ENST00000487572 GSAPA4D1B5 854 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 KRT87PA6NCN2 255 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 KDM1AO60341 852 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 MATN4O95460 622 aa19■□□□□ 0.63
SEC22A-208ENST00000487572 C1orf105O95561 183 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms