RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 A0A087X1B8 175 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 A6NCN8 305 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 SYF2O95926 243 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 FTH1P19P0C7X4 201 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 CBSLP0DN79 551 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 CD1DP15813 335 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 KRT4P19013 534 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 ACADLP28330 430 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 EPHA8P29322 1005 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 CBSP35520 551 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 ARRB1P49407 418 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 PLOD1Q02809 727 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 SLC18A2Q05940 514 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 CSHL1Q14406 222 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 AGAP9Q5VTM2 703 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 ABRAXAS1Q6UWZ7 409 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 CLEC14AQ86T13 490 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 SLCO6A1Q86UG4 719 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 GATAD2AQ86YP4 633 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 SRRM1Q8IYB3 904 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 NKAPQ8N5F7 415 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 FAM46DQ8NEK8 389 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 ACMSDQ8TDX5 336 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 SAP25Q8TEE9 199 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 PDLIM5Q96HC4 596 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 GPR78Q96P69 363 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 DPEP2Q9H4A9 486 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 WASH6PQ9NQA3 447 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
HDAC6-229ENST00000486665 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
HDAC6-229ENST00000486665 PIKFYVEQ9Y2I7 2098 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 APC2O95996 2303 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PRAMEF33A0A0G2JMD5 474 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 LMO7DNF2Z398 122 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CDC7O00311 574 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 OPA1O60313 960 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 DFNA5O60443 496 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 SPAG7O75391 227 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 KLHL2O95198 593 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CER1O95813 267 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 LTA4HP09960 611 aaKnown RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 MPC1LP0DKB6 136 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 ENO3P13929 434 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 ATP5DP30049 168 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 SLC26A3P40879 764 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CCNFP41002 786 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 KCNC1P48547 511 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 RGS4P49798 205 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 RPE65Q16518 533 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 DEFB133Q30KQ1 61 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 TAF1BQ53T94 588 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 TTMPQ5BVD1 217 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 C16orf46Q6P387 395 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 C19orf48Q6RUI8 117 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CDHR3Q6ZTQ4 885 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 NEK10Q6ZWH5 1172 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 TBC1D1Q86TI0 1168 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PDZD3Q86UT5 571 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PROSER1Q86XN7 944 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 RASGRP3Q8IV61 690 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 NAXDQ8IW45 347 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CNPY4Q8N129 248 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PHC3Q8NDX5 983 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CFAP61Q8NHU2 1237 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 ZDHHC1Q8WTX9 485 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 TLCD1Q96CP7 247 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 DERL2Q9GZP9 239 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 ADAMTS6Q9UKP5 1117 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CFAP20Q9Y6A4 193 aaKnown RBP12.47□□□□□ -0.41
HDAC6-229ENST00000486665 CSNK1G3Q9Y6M4 447 aa12.47□□□□□ -0.41
HDAC6-229ENST00000486665 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 FFAR2O15552 330 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 ZBTB14O43829 449 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 MATN4O95460 622 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 ANXA6P08133 673 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 SLC35G4P0C7Q5 338 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 COL6A2P12110 1019 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 SLC19A1P41440 591 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 GLRBP48167 497 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 CCT8P50990 548 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 OR4D1Q15615 310 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 DUS1LQ6P1R4 473 aaKnown RBP12.46□□□□□ -0.41
HDAC6-229ENST00000486665 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
HDAC6-229ENST00000486665 CCDC91Q7Z6B0 441 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms