RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PDLIM2Q96JY6 352 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 LRFN5Q96NI6 719 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 CATSPER2Q96P56 530 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 MAP3K3Q99759 626 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 TSSK1BQ9BXA7 367 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 AP1M1Q9BXS5 423 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 PITPNM3Q9BZ71 974 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 APMAPQ9HDC9 416 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 KCND1Q9NSA2 647 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 IMP3Q9NV31 184 aaKnown RBP6.81□□□□□ -1.32
VPS50-218ENST00000485994 OR6C2Q9NZP2 312 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 SLC2A6Q9UGQ3 507 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 ANAPC5Q9UJX4 755 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 POMT2Q9UKY4 750 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 PCDHGA6Q9Y5G7 932 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 PRSS21Q9Y6M0 314 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 BSNQ9UPA5 3926 aa6.81□□□□□ -1.32
VPS50-218ENST00000485994 HEATR5BQ9P2D3 2071 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ZNF462Q96JM2 2506 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 LOC101059948A0A1B0GTJ6 334 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 UBA6A0AVT1 1052 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR6C74A6NCV1 312 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR51F1A6NGY5 319 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ZNF891A8MT65 544 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 CCL22O00626 93 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PFDN6O15212 129 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CD3EAPO15446 510 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 KDM1AO60341 852 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR1I1O60431 355 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 RASSF9O75901 435 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PRSS56P0CW18 603 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 FOLR1P15328 257 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 AOAHP28039 575 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PRDX3P30048 256 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 CCR7P32248 378 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CXCR5P32302 372 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 STAT5AP42229 794 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ARCN1P48444 511 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 FNTAP49354 379 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PPM1FP49593 454 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 SEPHS1P49903 392 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KPNA2P52292 529 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 TUBB4BP68371 445 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 SH3BP2P78314 561 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 BASP1P80723 227 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 PRKAA1Q13131 559 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TUBB2AQ13885 445 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KRT33BQ14525 404 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KCNJ11Q14654 390 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PLCL1Q15111 1095 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TAF1BQ53T94 588 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 DNAJC21Q5F1R6 531 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 PLEKHS1Q5SXH7 462 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TMTC4Q5T4D3 741 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 IRGCQ6NXR0 463 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CCDC137Q6PK04 289 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 C6orf15Q6UXA7 325 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 PRUNE1Q86TP1 453 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TMEM135Q86UB9 458 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 AMIGO1Q86WK6 493 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 LMNTD2Q8IXW0 634 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 SLC22A15Q8IZD6 547 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ADGRF3Q8IZF5 1079 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PHC3Q8NDX5 983 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PPHLN1Q8NEY8 458 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR6P1Q8NGX9 317 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR5K2Q8NHB8 316 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ASZ1Q8WWH4 475 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 LCN9Q8WX39 176 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 SLCO2A1Q92959 643 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 MAGOHBQ96A72 148 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 KIAA1143Q96AT1 154 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 ZNF501Q96CX3 271 aaPredicted RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 PANX3Q96QZ0 392 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 OR6C1Q96RD1 312 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 OSBPL9Q96SU4 736 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TUBB2BQ9BVA1 445 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 P2RY12Q9H244 342 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ADNPQ9H2P0 1102 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 SRMSQ9H3Y6 488 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 FGF21Q9NSA1 209 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CATSPERZQ9NTU4 200 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PIH1D1Q9NWS0 290 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 CCDC88CQ9P219 2028 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KLHL3Q9UH77 587 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 TUBD1Q9UJT1 453 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 KCND3Q9UK17 655 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 RARRES3Q9UL19 164 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 PADI1Q9ULC6 663 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 SOX13Q9UN79 622 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CDYLQ9Y232 598 aa6.8□□□□□ -1.32
VPS50-218ENST00000485994 CFAP20Q9Y6A4 193 aaKnown RBP6.8□□□□□ -1.32
VPS50-218ENST00000485994 CNTRLQ7Z7A1 2325 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 FAM237BA0A1B0GVD1 139 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 SDR42E2A6NKP2 422 aa6.79□□□□□ -1.32
VPS50-218ENST00000485994 C2orf74A8MZ97 194 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms