RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 TMEM41AQ96HV5 264 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PKNOX2Q96KN3 472 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CASD1Q96PB1 797 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 QKIQ96PU8 341 aaKnown RBP eCLIP4.29□□□□□ -1.726e-6■■■■□ 20.5
TM9SF3-205ENST00000485093 KLF6Q99612 283 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PKMYT1Q99640 499 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 FERMT1Q9BQL6 677 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 DUSP26Q9BV47 211 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TKTL2Q9H0I9 626 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TRABDQ9H4I3 376 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CSNK1G1Q9HCP0 422 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 WDR6Q9NNW5 1121 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 DMAP1Q9NPF5 467 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 HEYLQ9NQ87 328 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TBC1D13Q9NVG8 400 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 RRN3Q9NYV6 651 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PSMC3IPQ9P2W1 217 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 DNAJB4Q9UDY4 337 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SLC24A2Q9UI40 661 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 MAD1L1Q9Y6D9 718 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PDCD11Q14690 1871 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 WDR91A4D1P6 747 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SRRM3A6NNA2 597 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TCP11X1B4DZS4 312 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 E7ESA3 106 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 H3BNC9 293 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 GOLGA8RI6L899 631 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 INPPL1O15357 1258 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 FAM155BO75949 473 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 KIAA0754O94854 1291 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 RASAL1O95294 804 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 NDST3O95803 873 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 FAM107AO95990 144 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 MOCS2O96007 188 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 JCHAINP01591 159 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 MBPP02686 304 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 APRTP07741 180 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 HMBSP08397 361 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 FBLP22087 321 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CYP2C18P33260 490 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PPM1AP35813 382 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 GRIA1P42261 906 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 HCAR3P49019 387 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SLC11A1P49279 550 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CXCR3P49682 368 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PGFP49763 221 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PRMT2P55345 433 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CCL23P55773 120 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PROK1P58294 105 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SARNPP82979 210 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DSC1Q08554 894 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 IFT88Q13099 833 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DPYSQ14117 519 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 GPNMBQ14956 572 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TCTN1Q2MV58 587 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PARP6Q2NL67 630 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 KLHL38Q2WGJ6 581 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TBC1D25Q3MII6 688 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 KBTBD12Q3ZCT8 623 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 HHATQ5VTY9 493 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CACHD1Q5VU97 1274 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 MRNIPQ6NTE8 343 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CRTC1Q6UUV9 634 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 BHLHA9Q7RTU4 235 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 BNIPLQ7Z465 357 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DEFB128Q7Z7B8 93 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SCD5Q86SK9 330 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PRPF39Q86UA1 669 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TAC4Q86UU9 113 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TRABD2AQ86V40 505 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 TDRPQ86YL5 185 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 ZNF567Q8N184 647 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 C4orf33Q8N1A6 199 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 NUP93Q8N1F7 819 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 RIBC1Q8N443 379 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 OTUD6BQ8N6M0 293 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 MCUQ8NE86 351 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 ZNF398Q8TD17 642 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DQX1Q8TE96 717 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DEPDC1BQ8WUY9 529 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CKAP2Q8WWK9 683 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CASP10Q92851 521 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 NTAN1Q96AB6 310 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 RTP4Q96DX8 246 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 PGAP3Q96FM1 320 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 CELF6Q96J87 481 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 B3GALT6Q96L58 329 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 SPATA13Q96N96 652 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 AGAP3Q96P47 875 aa4.28□□□□□ -1.72
TM9SF3-205ENST00000485093 DEFB118Q96PH6 123 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms