RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 OR11G2Q8NGC1 345 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 NACC2Q96BF6 587 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 TRIB3Q96RU7 358 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 SPSB2Q99619 263 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 TREX2Q9BQ50 279 aaPredicted RBP17.3■□□□□ 0.36
DDR1-245ENST00000484556 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDR1-245ENST00000484556 TNFRSF10DQ9UBN6 386 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 MEMO1Q9Y316 297 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 SPO11Q9Y5K1 396 aa17.3■□□□□ 0.36
DDR1-245ENST00000484556 CPAMD8Q8IZJ3 1885 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 C17orf113A0A1B0GUU1 675 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 BHMG1C9JSJ3 638 aaPredicted RBP17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A9O60656 530 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 POLBP06746 335 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 RARAP10276 462 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A6P19224 532 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ITGAXP20702 1163 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A1P22309 533 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A4P22310 534 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 NDUFS1P28331 727 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 GABRA4P48169 554 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ZIC1Q15915 447 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ACVR1CQ8NER5 493 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 MAGED4Q96JG8 741 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 FOXC2Q99958 501 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ZCCHC2Q9C0B9 1178 aaKnown RBP17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A7Q9HAW7 530 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A10Q9HAW8 530 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 UGT1A8Q9HAW9 530 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ZNF160Q9HCG1 818 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 GPAMQ9HCL2 828 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 DLL4Q9NR61 685 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 HAUS2Q9NVX0 235 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 AMACRQ9UHK6 382 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 COLEC10Q9Y6Z7 277 aa17.29■□□□□ 0.36
DDR1-245ENST00000484556 ABCA4P78363 2273 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 ALAS2P22557 587 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 UBE2HP62256 183 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 PCSK7Q16549 785 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 NKG7Q16617 165 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 LILRA3Q8N6C8 439 aaPredicted RBP17.28■□□□□ 0.36
DDR1-245ENST00000484556 XKR8Q9H6D3 395 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 CCM2LQ9NUG4 571 aaPredicted RBP17.28■□□□□ 0.36
DDR1-245ENST00000484556 ACTR10Q9NZ32 417 aa17.28■□□□□ 0.36
DDR1-245ENST00000484556 RPH3AQ9Y2J0 694 aaPredicted RBP17.28■□□□□ 0.36
DDR1-245ENST00000484556 DNMT3AQ9Y6K1 912 aaPredicted RBP17.28■□□□□ 0.36
DDR1-245ENST00000484556 MGAT4DA6NG13 374 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 C2orf74A8MZ97 194 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 CD48P09326 243 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 CCNCP24863 283 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 SOX11P35716 441 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 IFI16Q16666 785 aaKnown RBP17.27■□□□□ 0.36
DDR1-245ENST00000484556 LONRF1Q17RB8 773 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 NCBP2-AS2Q69YL0 99 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 SIRT6Q8N6T7 355 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 DDHD1Q8NEL9 900 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 DNAJB8Q8NHS0 232 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 BRIX1Q8TDN6 353 aaKnown RBP17.27■□□□□ 0.36
DDR1-245ENST00000484556 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.27■□□□□ 0.36
DDR1-245ENST00000484556 FKBP10Q96AY3 582 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 ACSL5Q9ULC5 683 aa17.27■□□□□ 0.36
DDR1-245ENST00000484556 SNRNP200O75643 2136 aaKnown RBP17.27■□□□□ 0.35
DDR1-245ENST00000484556 ZNHIT1O43257 154 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 AKT1P31749 480 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 PCK1P35558 622 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 KRT81Q14533 505 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 BOLA3Q53S33 107 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 LDLRAP1Q5SW96 308 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 TLDC1Q6P9B6 456 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 SPESP1Q6UW49 350 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 FAM151BQ6UXP7 276 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 TTLL10Q6ZVT0 673 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 COX15Q7KZN9 410 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 OVCH1Q7RTY7 1134 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 DAAM2Q86T65 1068 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 NT5DC3Q86UY8 548 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 HOOK3Q86VS8 718 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 ADGRF3Q8IZF5 1079 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 OR52E1Q8NGJ3 308 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 CCDC110Q8TBZ0 833 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 PSMF1Q92530 271 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 RBM41Q96IZ5 413 aaKnown RBP17.26■□□□□ 0.35
DDR1-245ENST00000484556 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 CEP41Q9BYV8 373 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 WDR54Q9H977 334 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 MRM3Q9HC36 420 aaKnown RBP17.26■□□□□ 0.35
DDR1-245ENST00000484556 IL26Q9NPH9 171 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 CTSFQ9UBX1 484 aa17.26■□□□□ 0.35
DDR1-245ENST00000484556 NSD1Q96L73 2696 aaPredicted RBP17.25■□□□□ 0.35
DDR1-245ENST00000484556 KIAA1324LA8MWY0 1029 aaPredicted RBP17.25■□□□□ 0.35
DDR1-245ENST00000484556 KCNK1O00180 336 aa17.25■□□□□ 0.35
DDR1-245ENST00000484556 UQCRHP07919 91 aa17.25■□□□□ 0.35
DDR1-245ENST00000484556 ZBTB17Q13105 803 aa17.25■□□□□ 0.35
DDR1-245ENST00000484556 CEBPEQ15744 281 aa17.25■□□□□ 0.35
DDR1-245ENST00000484556 PPP2R5EQ16537 467 aa17.25■□□□□ 0.35
DDR1-245ENST00000484556 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms