RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KLHL3Q9UH77 587 aa20.35■□□□□ 0.85
SEC13-217ENST00000482647 DMGDHQ9UI17 866 aaKnown RBP20.35■□□□□ 0.85
SEC13-217ENST00000482647 OR5K3A6NET4 321 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 A8MU76 341 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 TOX3O15405 576 aaPredicted RBP20.34■□□□□ 0.85
SEC13-217ENST00000482647 DXOO77932 396 aaKnown RBP20.34■□□□□ 0.85
SEC13-217ENST00000482647 C9P02748 559 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 CAPNS1P04632 268 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 JMJD7P0C870 316 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 GABRB3P28472 473 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 ATP5DP30049 168 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 CSTF2P33240 577 aaKnown RBP eCLIP20.34■□□□□ 0.85
SEC13-217ENST00000482647 MAGEA4P43358 317 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 CLCN7P51798 805 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 GFERP55789 205 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 TTLL9Q3SXZ7 439 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 IRGCQ6NXR0 463 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 IGF2-ASQ6U949 168 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 UNC5DQ6UXZ4 953 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 ARHGAP22Q7Z5H3 698 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 OR52E1Q8NGJ3 308 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 CFAP61Q8NHU2 1237 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 FOPNLQ96NB1 174 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 SLC46A1Q96NT5 459 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 AARSD1Q9BTE6 412 aaKnown RBP20.34■□□□□ 0.85
SEC13-217ENST00000482647 ZDHHC18Q9NUE0 388 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 GALPQ9UBC7 116 aa20.34■□□□□ 0.85
SEC13-217ENST00000482647 TDRKHQ9Y2W6 561 aaKnown RBP20.34■□□□□ 0.85
SEC13-217ENST00000482647 WDFY3Q8IZQ1 3526 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 PIKFYVEQ9Y2I7 2098 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 OR6C74A6NCV1 312 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 AGRPO00253 132 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 VPS26AO75436 327 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 TNFSF15O95150 251 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 GSTA2P09210 222 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 MLLT3P42568 568 aaPredicted RBP20.33■□□□□ 0.85
SEC13-217ENST00000482647 PRKAA1Q13131 559 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 CAPN12Q6ZSI9 719 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 CEP128Q6ZU80 1094 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 C3orf62Q6ZUJ4 267 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 CYS1Q717R9 158 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 AMIGO1Q86WK6 493 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 IFT81Q8WYA0 676 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 INPP5DQ92835 1189 aa20.33■□□□□ 0.85
SEC13-217ENST00000482647 PRR11Q96HE9 360 aaPredicted RBP20.33■□□□□ 0.85
SEC13-217ENST00000482647 MTRF1LQ9UGC7 380 aaKnown RBP20.33■□□□□ 0.85
SEC13-217ENST00000482647 MATN2O00339 956 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 RASSF9O75901 435 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 ITGA2BP08514 1039 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 ANKRD34CP0C6C1 535 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 HGFP14210 728 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 SSTR1P30872 391 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 SKIV2L2P42285 1042 aaKnown RBP20.32■□□□□ 0.84
SEC13-217ENST00000482647 GBX1Q14549 363 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 UGT3A1Q6NUS8 523 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 TTC23LQ6PF05 361 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 FAM92BQ6ZTR7 304 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 SLC26A11Q86WA9 606 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 SIDT2Q8NBJ9 832 aaKnown RBP20.32■□□□□ 0.84
SEC13-217ENST00000482647 ZCCHC14Q8WYQ9 949 aaKnown RBP20.32■□□□□ 0.84
SEC13-217ENST00000482647 ZNF578Q96N58 590 aaPredicted RBP20.32■□□□□ 0.84
SEC13-217ENST00000482647 TSPYL1Q9H0U9 437 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 NSMCE4AQ9NXX6 385 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 SLC17A6Q9P2U8 582 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 PISDQ9UG56 409 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 CORO1CQ9ULV4 474 aaPredicted RBP20.32■□□□□ 0.84
SEC13-217ENST00000482647 MED16Q9Y2X0 877 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 DHRS7Q9Y394 339 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 IGF2RP11717 2491 aa20.32■□□□□ 0.84
SEC13-217ENST00000482647 COL27A1Q8IZC6 1860 aaPredicted RBP20.31■□□□□ 0.84
SEC13-217ENST00000482647 PMS2P1A4D2B8 440 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 SHMT2P34897 504 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 ERVPABLB-1P60509 514 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 ACSBG2Q5FVE4 666 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 DNTTIP2Q5QJE6 756 aaKnown RBP20.31■□□□□ 0.84
SEC13-217ENST00000482647 CACHD1Q5VU97 1274 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 PRSS42Q7Z5A4 293 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 DCUN1D3Q8IWE4 304 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 CDKL2Q92772 493 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 CD180Q99467 661 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 NDNQ99608 321 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 GPR21Q99679 349 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 XKR8Q9H6D3 395 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 THSD1Q9NS62 852 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 TAS2R13Q9NYV9 303 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 DMXL2Q8TDJ6 3036 aa20.31■□□□□ 0.84
SEC13-217ENST00000482647 TCRBV9S1A1TA0A576 114 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 KIF1CO43896 1103 aaKnown RBP20.3■□□□□ 0.84
SEC13-217ENST00000482647 CBSLP0DN79 551 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 CCL4P13236 92 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 POLR2CP19387 275 aaPredicted RBP20.3■□□□□ 0.84
SEC13-217ENST00000482647 CBSP35520 551 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 CCNFP41002 786 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 ILF2Q12905 390 aaKnown RBP20.3■□□□□ 0.84
SEC13-217ENST00000482647 TBC1D25Q3MII6 688 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 NEK10Q6ZWH5 1172 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 STRA8Q7Z7C7 330 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 FAM129CQ86XR2 697 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 MAGEC3Q8TD91 643 aa20.3■□□□□ 0.84
SEC13-217ENST00000482647 ZNF768Q9H5H4 540 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms