RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LCN9Q8WX39 176 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 RSC1A1Q92681 617 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 FAM136AQ96C01 138 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 ATXN7L3BQ96GX2 97 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 LIN37Q96GY3 246 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-219ENST00000479941 NDNQ99608 321 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 GPR21Q99679 349 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 RAB33BQ9H082 229 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 SMYD2Q9NRG4 433 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 TXNDC16Q9P2K2 825 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 GALPQ9UBC7 116 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 EPHA6Q9UF33 1036 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 TRMT6Q9UJA5 497 aaKnown RBP10.54□□□□□ -0.72
ATG4B-219ENST00000479941 NFU1Q9UMS0 254 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 VWA7Q9Y334 891 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
ATG4B-219ENST00000479941 TPRP12270 2363 aaKnown RBP10.54□□□□□ -0.72
ATG4B-219ENST00000479941 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-219ENST00000479941 CCDC187A0A096LP49 1063 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 IGHV5-10-1A0A0J9YXX1 117 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 OR5K3A6NET4 321 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 MATN2O00339 956 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 HGSO14964 777 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 TOX3O15405 576 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 SLU7O95391 586 aaKnown RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 MATN4O95460 622 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 C1QAP02745 245 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 C9P02748 559 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 HOXB3P14651 431 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CCNFP41002 786 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 ABRQ12979 859 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 PRKAA1Q13131 559 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 PRKG2Q13237 762 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 NAB1Q13506 487 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 KLHL38Q2WGJ6 581 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 KBTBD12Q3ZCT8 623 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 ACSBG2Q5FVE4 666 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 RBM20Q5T481 1227 aaKnown RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 PHF19Q5T6S3 580 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 HECTD2Q5U5R9 776 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 NEK10Q6ZWH5 1172 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 B3GNT8Q7Z7M8 397 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 ZC3HC1Q86WB0 502 aaKnown RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 MARCH9Q86YJ5 346 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 DCUN1D3Q8IWE4 304 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CTAGE3PQ8IX95 158 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 GPATCH11Q8N954 259 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 OR4E2Q8NGC2 313 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CFAP61Q8NHU2 1237 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 GIMAP7Q8NHV1 300 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 WDR36Q8NI36 951 aaKnown RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 MAGEC3Q8TD91 643 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 FBF1Q8TES7 1133 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 RAD51AP1Q96B01 352 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 ZDHHC12Q96GR4 267 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 SLC30A3Q99726 388 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CPNE1Q99829 537 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 MCMBPQ9BTE3 642 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 HGH1Q9BTY7 390 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 CDC42EP4Q9H3Q1 356 aaKnown RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 SEMA6CQ9H3T2 930 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 SRMSQ9H3Y6 488 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 RHOJQ9H4E5 214 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 HRASLS2Q9NWW9 162 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 NINJ2Q9NZG7 142 aa10.53□□□□□ -0.72
ATG4B-219ENST00000479941 AKAP7Q9P0M2 348 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 COL27A1Q8IZC6 1860 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-219ENST00000479941 IGF2RP11717 2491 aa10.52□□□□□ -0.72
ATG4B-219ENST00000479941 TRABD2BA6NFA1 517 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 C1orf105O95561 183 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 MPC1LP0DKB6 136 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 FDXRP22570 491 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 MPSTP25325 297 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 SHMT2P34897 504 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 SPRP35270 261 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 GP5P40197 560 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 ABCG1P45844 678 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 RGS4P49798 205 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 CDKN2DP55273 166 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 TIAL1Q01085 375 aaKnown RBP eCLIP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 GRTP1Q5TC63 336 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 ARMC6Q6NXE6 501 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 RAB11FIP2Q7L804 512 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 AMIGO1Q86WK6 493 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 LSMEM2Q8N112 164 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 RAB42Q8N4Z0 105 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 JPH3Q8WXH2 748 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.73
ATG4B-219ENST00000479941 NXPE2Q96DL1 559 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 VPS39Q96JC1 886 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 CCDC74BQ96LY2 380 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 TGM7Q96PF1 710 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 CYTH2Q99418 400 aa10.52□□□□□ -0.73
ATG4B-219ENST00000479941 CMKLR1Q99788 373 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms