RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 SLC9A4Q6AI14 798 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 MRPL14Q6P1L8 145 aaKnown RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 AMIGO1Q86WK6 493 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 PHC3Q8NDX5 983 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 RELTQ969Z4 430 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 NACC2Q96BF6 587 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 LURAP1Q96LR2 239 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 FAM60AQ9NP50 221 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 TXLNGQ9NUQ3 528 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 ACTR10Q9NZ32 417 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 CTTNBP2NLQ9P2B4 639 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 DHCR7Q9UBM7 475 aaKnown RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 FBXL4Q9UKA2 621 aa16.59■□□□□ 0.25
VIM-204ENST00000478746 KLF2Q9Y5W3 355 aaPredicted RBP16.59■□□□□ 0.25
VIM-204ENST00000478746 A0A087X0T9 212 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 JRKO75564 520 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 PRAMEF1O95521 474 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 FAM228BP0C875 321 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 ZFXP17010 805 aaPredicted RBP16.58■□□□□ 0.24
VIM-204ENST00000478746 PTPN3P26045 913 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 PTGER4P35408 488 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 PTPRCAPQ14761 206 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 TLR1Q15399 786 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 FCRL6Q6DN72 434 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 SARM1Q6SZW1 724 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 FAM180AQ6UWF9 173 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 TMEM151BQ8IW70 566 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 ADGRF3Q8IZF5 1079 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 ZNF655Q8N720 491 aaPredicted RBP16.58■□□□□ 0.24
VIM-204ENST00000478746 C19orf47Q8N9M1 422 aaKnown RBP16.58■□□□□ 0.24
VIM-204ENST00000478746 OR52E1Q8NGJ3 308 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.58■□□□□ 0.24
VIM-204ENST00000478746 DCUN1D1Q96GG9 259 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 OLFM3Q96PB7 478 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 XKR8Q9H6D3 395 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 EPS8L2Q9H6S3 715 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 ASB8Q9H765 288 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 SLC6A20Q9NP91 592 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 PKDREJQ9NTG1 2253 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 ITPR3Q14573 2671 aa16.58■□□□□ 0.24
VIM-204ENST00000478746 AKAP9Q99996 3911 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 DCHS2Q6V1P9 2916 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 ZNF487B1APH4 448 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 IFRD1O00458 451 aaPredicted RBP16.57■□□□□ 0.24
VIM-204ENST00000478746 ZSCAN9O15535 394 aaPredicted RBP16.57■□□□□ 0.24
VIM-204ENST00000478746 HCRTR1O43613 425 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 SGTAO43765 313 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 ALOX12BO75342 701 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 SERPING1P05155 500 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 RALBP11234 206 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 MMP11P24347 488 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 CD68P34810 354 aaPredicted RBP16.57■□□□□ 0.24
VIM-204ENST00000478746 PRKG2Q13237 762 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 DEFB110Q30KQ9 67 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 TLDC1Q6P9B6 456 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 SPESP1Q6UW49 350 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 BCORP1Q8N888 145 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 SLX1AQ9BQ83 275 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 MVB12BQ9H7P6 319 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 CHST11Q9NPF2 352 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 OLAHQ9NV23 265 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 IRAK4Q9NWZ3 460 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 UVRAGQ9P2Y5 699 aa16.57■□□□□ 0.24
VIM-204ENST00000478746 CCDC168Q8NDH2 2452 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 MED13LQ71F56 2210 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 C17orf113A0A1B0GUU1 675 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 CCDC78A2IDD5 438 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 SNRPB2P08579 225 aaKnown RBP16.56■□□□□ 0.24
VIM-204ENST00000478746 NFKB1P19838 968 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 ALAS2P22557 587 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 GABRA4P48169 554 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 OTUD4Q01804 1114 aaKnown RBP16.56■□□□□ 0.24
VIM-204ENST00000478746 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 RFX6Q8HWS3 928 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 ITLN2Q8WWU7 325 aaPredicted RBP16.56■□□□□ 0.24
VIM-204ENST00000478746 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
VIM-204ENST00000478746 MRGPRX2Q96LB1 330 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
VIM-204ENST00000478746 NDC1Q9BTX1 674 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 LHPPQ9H008 270 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 LCMT1Q9UIC8 334 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 CDC23Q9UJX2 597 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 ZFHX3Q15911 3703 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 PCM1Q15154 2024 aa16.56■□□□□ 0.24
VIM-204ENST00000478746 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 SRP72O76094 671 aaKnown RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 CTSBP07858 339 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 COX6B1P14854 86 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 HTR1EP28566 365 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 CD151P48509 253 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 KCNK10P57789 538 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 DYNLT1P63172 113 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms