RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	MSL3P1	P0C860	447 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF28	P17035	718 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	MSH3	P20585	1137 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	MPST	P25325	297 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	AOAH	P28039	575 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCR7	P32248	378 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	NPY2R	P49146	381 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	KPNA2	P52292	529 aa	Known RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SEPT7	Q16181	437 aa	Known RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	OCLN	Q16625	522 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	STEAP4	Q687X5	459 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC70	Q6NSX1	233 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF549	Q6P9A3	640 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	C19orf48	Q6RUI8	117 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	USP53	Q70EK8	1073 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CENPU	Q71F23	418 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	IGDCC3	Q8IVU1	814 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ADGRF3	Q8IZF5	1079 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	AVL9	Q8NBF6	648 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF248	Q8NDW4	579 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	DENND1A	Q8TEH3	1009 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	HEXDC	Q8WVB3	486 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	JPH3	Q8WXH2	748 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PPM1M	Q96MI6	270 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	COPS8	Q99627	209 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SPOCK3	Q9BQ16	436 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCM2	Q9BSQ5	444 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CARD6	Q9BX69	1037 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	IL22	Q9GZX6	179 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	TFB2M	Q9H5Q4	396 aa	Known RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	HOMER3	Q9NSC5	361 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	GALP	Q9UBC7	116 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	POMT2	Q9UKY4	750 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ACSL5	Q9ULC5	683 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	BTRC	Q9Y297	605 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	DNAJC16	Q9Y2G8	782 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	FAM208B	Q5VWN6	2430 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	IGHV5-51	A0A0C4DH38	117 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC78	A2IDD5	438 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188		K7ENP7	123 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	BTN3A3	O00478	584 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	BTN3A1	O00481	513 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	DNALI1	O14645	258 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SNX2	O60749	519 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLCO2B1	O94956	709 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	WISP3	O95389	354 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	APRT	P07741	180 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	F7	P08709	466 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	LIPC	P11150	499 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	FGF5	P12034	268 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	IDS	P22304	550 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CD82	P27701	267 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	NSG1	P42857	185 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PREP	P48147	710 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	LINC00303	Q3SY05	128 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	AMZ1	Q400G9	498 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	MAP9	Q49MG5	647 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	INO80C	Q6PI98	192 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC137	Q6PK04	289 aa	Known RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	NLRP9	Q7RTR0	991 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	LDB1	Q86U70	411 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PIM3	Q86V86	326 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZFAND4	Q86XD8	727 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CNTN4	Q8IWV2	1026 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	D2HGDH	Q8N465	521 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PAF1	Q8N7H5	531 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	OR4L1	Q8NH43	312 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	NKD1	Q969G9	470 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SH3KBP1	Q96B97	665 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	MFSD3	Q96ES6	412 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC30A3	Q99726	388 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SLC12A9	Q9BXP2	914 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CHRNA10	Q9GZZ6	450 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	SYNPO2L	Q9H987	977 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CRLS1	Q9UJA2	301 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PILRA	Q9UKJ1	303 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	PSMD13	Q9UNM6	376 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	KLK4	Q9Y5K2	254 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	B3GALT1	Q9Y5Z6	326 aa		4.12	□□□□□ -1.75
POLR2B-208	ENST00000478188	CPAMD8	Q8IZJ3	1885 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	FAM237B	A0A1B0GVD1	139 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188		A0A1W2PPV9	198 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188		E7ESA3	106 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZSCAN12	O43309	604 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	HCRTR1	O43613	425 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	IFNB1	P01574	187 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	CAPN1	P07384	714 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	BMP4	P12644	408 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	NELFE	P18615	380 aa	Known RBP	4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	GABRB3	P28472	473 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	ALDH4A1	P30038	563 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	PKLR	P30613	574 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	CLCN7	P51798	805 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	CCDC173	Q0VFZ6	552 aa		4.11	□□□□□ -1.75
POLR2B-208	ENST00000478188	GTF2H3	Q13889	308 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms