RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 TMEM135Q86UB9 458 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 SPNS2Q8IVW8 549 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 TBC1D21Q8IYX1 336 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 LSM14AQ8ND56 463 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 CALML6Q8TD86 181 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 TFGQ92734 400 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 MFSD3Q96ES6 412 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 FCRL4Q96PJ5 515 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 OR6C1Q96RD1 312 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 NAT9Q9BTE0 207 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 PYCARDQ9ULZ3 195 aa13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 MRPS18BQ9Y676 258 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-208ENST00000477928 BOD1L1Q8NFC6 3051 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 TLCD2A6NGC4 264 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 PYCARD-AS1I3L0S3 204 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 DNALI1O14645 258 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 GPC4O75487 556 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 NDUFS3O75489 264 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 TMEM63AO94886 807 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 TTC4O95801 387 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 DLGAP3O95886 979 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 ESR1P03372 595 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 APOA4P06727 396 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 FAM87AP0C7U9 286 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 F8A1P23610 371 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 ACADLP28330 430 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 NMBRP28336 390 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 KPNA2P52292 529 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 DHX34Q14147 1143 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 TMED2Q15363 201 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 RNASEH2BQ5TBB1 312 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 ARMC6Q6NXE6 501 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 SLC22A15Q8IZD6 547 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 OR5K2Q8NHB8 316 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 LKAAEAR1Q8TD35 194 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 SLC41A2Q96JW4 573 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 FERD3LQ96RJ6 166 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 EFHD1Q9BUP0 239 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 P2RY12Q9H244 342 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 XKR8Q9H6D3 395 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 SYTL2Q9HCH5 934 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 INTS10Q9NVR2 710 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 HRASLS2Q9NWW9 162 aa13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 MARCH4Q9P2E8 410 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-208ENST00000477928 POLR1CO15160 346 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 SLCO2B1O94956 709 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 VAPBO95292 243 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 F7P08709 466 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 EBLN1P0CF75 366 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 PRKAR1AP10644 381 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ITGB6P18564 788 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 NELFEP18615 380 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 POLR2CP19387 275 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ARNTP27540 789 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ACY1Q03154 408 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 PRKG2Q13237 762 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 MORF4L2Q15014 288 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 TBR1Q16650 682 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 LMNTD1Q8N9Z9 388 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 OR8K5Q8NH50 307 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 LCN9Q8WX39 176 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 RUFY1Q96T51 708 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 TRIM56Q9BRZ2 755 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 HGH1Q9BTY7 390 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ULBP3Q9BZM4 244 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 KLHL25Q9H0H3 589 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 DDX47Q9H0S4 455 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 LATS2Q9NRM7 1088 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 OR6C2Q9NZP2 312 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 ASIC3Q9UHC3 531 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 TMEM184BQ9Y519 407 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 COMMD10Q9Y6G5 202 aa13.41□□□□□ -0.26
SOX2-OT-208ENST00000477928 UBA6A0AVT1 1052 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 IQCF5A8MTL0 148 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 BTN3A3O00478 584 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 NKX2-8O15522 239 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 MAP3K7O43318 606 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 KIAA0754O94854 1291 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 ZBTB11O95625 1053 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 TPBGLP0DKB5 382 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 FGF5P12034 268 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 MAP4P27816 1152 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 AOAHP28039 575 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 ATP5DP30049 168 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 SHMT2P34897 504 aa13.4□□□□□ -0.26
SOX2-OT-208ENST00000477928 PTGIRP43119 386 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms