RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 DTX1Q86Y01 620 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 PPIL6Q8IXY8 311 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 MREGQ8N565 214 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 OTUD6BQ8N6M0 293 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 FBXO25Q8TCJ0 367 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 NKD1Q969G9 470 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 PPM1MQ96MI6 270 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 OR6C1Q96RD1 312 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 TTC1Q99614 292 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 MAP3K3Q99759 626 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 DDA1Q9BW61 102 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ASPSCR1Q9BZE9 553 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 IL22Q9GZX6 179 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF768Q9H5H4 540 aaKnown RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 XKR8Q9H6D3 395 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 KIR3DX1Q9H7L2 352 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 VIPAS39Q9H9C1 493 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 VPS37BQ9H9H4 285 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 FBXO8Q9NRD0 319 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 CATSPERZQ9NTU4 200 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 ZDHHC18Q9NUE0 388 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 BFARQ9NZS9 450 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 MARCH4Q9P2E8 410 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-221ENST00000477561 EPHA6Q9UF33 1036 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 RIMKLBQ9ULI2 386 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 COLEC10Q9Y6Z7 277 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 IGSF10Q6WRI0 2623 aa8.06□□□□□ -1.12
HDAC6-221ENST00000477561 FAM208BQ5VWN6 2430 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 UBA6A0AVT1 1052 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 RAD1O60671 282 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TMEM63AO94886 807 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 FTH1P02794 183 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PRB1P04280 392 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF28P17035 718 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TPSB2P20231 275 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 NDUFS1P28331 727 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 ARL4DP49703 201 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 ATP1A2P50993 1020 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CYP4F2P78329 520 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SARNPP82979 210 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 GPS2Q13227 327 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CASP8Q14790 479 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TPSAB1Q15661 275 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SYTL3Q4VX76 610 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 RNASEH2BQ5TBB1 312 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 ARMC6Q6NXE6 501 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CASC4Q6P4E1 433 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 KLHL35Q6PF15 583 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PCSK4Q6UW60 755 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PACS1Q6VY07 963 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TIPARPQ7Z3E1 657 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PRSS42Q7Z5A4 293 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CAND1Q86VP6 1230 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 OOSP2Q86WS3 158 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 RASGRP3Q8IV61 690 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 UNC5BQ8IZJ1 945 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CACNA2D3Q8IZS8 1091 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 KRT222Q8N1A0 295 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 MPP5Q8N3R9 675 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 IL22RA1Q8N6P7 574 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SIDT2Q8NBJ9 832 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 OR52E1Q8NGJ3 308 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 LKAAEAR1Q8TD35 194 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 LCN9Q8WX39 176 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 KLHL6Q8WZ60 621 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 CPT1BQ92523 772 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TFGQ92734 400 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 MFSD3Q96ES6 412 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PKNOX2Q96KN3 472 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TRIM56Q9BRZ2 755 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 HGH1Q9BTY7 390 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PHACTR1Q9C0D0 580 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 B3GNT4Q9C0J1 378 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 RAB33BQ9H082 229 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SRMSQ9H3Y6 488 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TREX1Q9NSU2 369 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SIDT1Q9NXL6 827 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PILRAQ9UKJ1 303 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 TDRKHQ9Y2W6 561 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 HEBP2Q9Y5Z4 205 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
HDAC6-221ENST00000477561 SMG1Q96Q15 3661 aaKnown RBP8.05□□□□□ -1.12
HDAC6-221ENST00000477561 PTPRQQ9UMZ3 2332 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 LOC101059948A0A1B0GTJ6 334 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 SLC5A10A0PJK1 596 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 GSAPA4D1B5 854 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 EIF4E1BA6NMX2 242 aaKnown RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 AP3B1O00203 1094 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 QSOX1O00391 747 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 BTN3A3O00478 584 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 MAP2K7O14733 419 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 LIN7AO14910 233 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 TOX3O15405 576 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-221ENST00000477561 NDUFS3O75489 264 aa8.04□□□□□ -1.12
HDAC6-221ENST00000477561 STK17BO94768 372 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms