RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC29A1Q99808 456 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 OR2AG1Q9H205 316 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 CRISPLD1Q9H336 500 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SMURF2Q9HAU4 748 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 DEC1Q9P2X7 70 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 OGDHLQ9ULD0 1010 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TMCO1Q9UM00 188 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 DOLKQ9UPQ8 538 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 RP1L1Q8IWN7 2480 aaPredicted RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 AQP12BA6NM10 295 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 NME4O00746 187 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TEX28O15482 410 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 FOXD2O60548 495 aaPredicted RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TGFB1P01137 390 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 EPHX1P07099 455 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF16P17020 682 aaPredicted RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ST13P50502 369 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ABRAXAS2Q15018 415 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 CYP2A13Q16696 494 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ZC3H12BQ5HYM0 836 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 PAGE2BQ5JRK9 111 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TPGS2Q68CL5 300 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 KLHDC10Q6PID8 442 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 KCTD8Q6ZWB6 473 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 GALNT10Q86SR1 603 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 AQP12AQ8IXF9 295 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ADGRG2Q8IZP9 1017 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SDR16C5Q8N3Y7 309 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TBC1D19Q8N5T2 526 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 CXorf40AQ8TE69 158 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SMG7Q92540 1137 aaKnown RBP10.81□□□□□ -0.68
COL27A1-204ENST00000477421 DPF3Q92784 378 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 LRCH3Q96II8 777 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 MEAF6Q9HAF1 191 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 USE1Q9NZ43 259 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 AHSPQ9NZD4 102 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 ACTR3BQ9P1U1 418 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 TESMINQ9Y4I5 508 aa10.81□□□□□ -0.68
COL27A1-204ENST00000477421 SUV39H1O43463 412 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 HTRA2O43464 458 aaPredicted RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ATG13O75143 517 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 RFPL2O75678 378 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 CYP7B1O75881 506 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DLGAP3O95886 979 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 STATHP02808 62 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 CCNA2P20248 432 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ARNTP27540 789 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC26A3P40879 764 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 RUNX1T1Q06455 604 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 C2orf80Q0P641 193 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 TRAP1Q12931 704 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SEMA3AQ14563 771 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC44A4Q53GD3 710 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ARMC3Q5W041 872 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 THAP5Q7Z6K1 395 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ZDHHC21Q8IVQ6 265 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 MFSD6LQ8IWD5 586 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 OR4A15Q8NGL6 344 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 KCNN1Q92952 543 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DAPK2Q9UIK4 370 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PNMA8CA0A1B0GUJ8 204 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 B4GALT3O60512 393 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SNAP29O95721 258 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 FADS2O95864 444 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DBTP11182 482 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 HLA-EP13747 358 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 IGFBP5P24593 272 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 OR4D2P58180 307 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SPIBQ01892 262 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 LMAN2Q12907 356 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 GPRC6AQ5T6X5 926 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DEPDC1Q5TB30 811 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PDE12Q6L8Q7 609 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DCAF4L2Q8NA75 395 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF296Q8WUU4 475 aaPredicted RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PPCDCQ96CD2 204 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 OTUB1Q96FW1 271 aaPredicted RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC22A12Q96S37 553 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 CTPS2Q9NRF8 586 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 FARSBQ9NSD9 589 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 DHRS7Q9Y394 339 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PCDHGA7Q9Y5G6 932 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 IFNA14P01570 189 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 APOA1P02647 267 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 EIF2S1P05198 315 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 FESP07332 822 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC6A2P23975 617 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ADAM17P78536 824 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 MADCAM1Q13477 382 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 PHKG1Q16816 387 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 HKDC1Q2TB90 917 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 RFTN2Q52LD8 501 aaPredicted RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 ERMP1Q7Z2K6 904 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
COL27A1-204ENST00000477421 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 RGL4Q8IZJ4 473 aa10.8□□□□□ -0.68
COL27A1-204ENST00000477421 VANGL1Q8TAA9 524 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 405.6 ms