RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PRAMEF13Q5VWM6 474 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF324BQ6AW86 544 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 FCRL6Q6DN72 434 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 RBM43Q6ZSC3 357 aaKnown RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 PARP9Q8IXQ6 854 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 CFAP206Q8IYR0 622 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 NACC2Q96BF6 587 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 LINC00615Q96LM1 132 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 OLFM3Q96PB7 478 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 AP1M1Q9BXS5 423 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 KRTAP3-3Q9BYR6 98 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 KRTAP3-2Q9BYR7 98 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 TFB2MQ9H5Q4 396 aaKnown RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 SLC6A20Q9NP91 592 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 OLAHQ9NV23 265 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 DHCR7Q9UBM7 475 aaKnown RBP10.98□□□□□ -0.65
BRCA1-213ENST00000476777 AKAP6Q13023 2319 aa10.98□□□□□ -0.65
BRCA1-213ENST00000476777 A0A0A6YYK5 440 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 C2orf74A8MZ97 194 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 BUD23O43709 281 aaKnown RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 JRKO75564 520 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 CTSBP07858 339 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 SNRPB2P08579 225 aaKnown RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 PYGMP11217 842 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 MMP11P24347 488 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 KDELR1P24390 212 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 HTR1EP28566 365 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 CHRNA4P43681 627 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 WNT3AP56704 352 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 KCNK10P57789 538 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 PDK1Q15118 436 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ZIC1Q15915 447 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF630Q2M218 657 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 DEFB110Q30KQ9 67 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 SIRPB2Q5JXA9 342 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 KDELC1Q6UW63 502 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 FAM180AQ6UWF9 173 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 BNC2Q6ZN30 1099 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ADGRF3Q8IZF5 1079 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF655Q8N720 491 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 BCORP1Q8N888 145 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 C19orf47Q8N9M1 422 aaKnown RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 OR52E1Q8NGJ3 308 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF398Q8TD17 642 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 N4BP2L2Q92802 583 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-213ENST00000476777 FERD3LQ96RJ6 166 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 CCM2Q9BSQ5 444 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 TRIM8Q9BZR9 551 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 DEF6Q9H4E7 631 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 CHST11Q9NPF2 352 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 SLC22A11Q9NSA0 550 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ACTR10Q9NZ32 417 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 HACD3Q9P035 362 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 FAM153AQ9UHL3 310 aa10.97□□□□□ -0.65
BRCA1-213ENST00000476777 ABCA4P78363 2273 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 SOCS6O14544 535 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PCDH17O14917 1159 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 ZSCAN9O15535 394 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PROSCO94903 275 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PRAMEF1O95521 474 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 EPOP01588 193 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 COX6B1P14854 86 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PTPN3P26045 913 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 CD68P34810 354 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 TDGF1P3P51864 188 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PTPRCAPQ14761 206 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 RPUSD3Q6P087 351 aaKnown RBP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 SPESP1Q6UW49 350 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 NPNTQ6UXI9 565 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 GLT6D1Q7Z4J2 308 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 TRIM73Q86UV7 250 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 AMIGO1Q86WK6 493 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 ZNF295-AS1Q8N0V1 137 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 NXPE1Q8N323 547 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 SLC25A41Q8N5S1 370 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PHC3Q8NDX5 983 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 HM13Q8TCT9 377 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 BLOC1S5Q8TDH9 187 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 CCDC120Q96HB5 630 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 RBM41Q96IZ5 413 aaKnown RBP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 TEKT5Q96M29 485 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 TRIM56Q9BRZ2 755 aaKnown RBP10.96□□□□□ -0.65
BRCA1-213ENST00000476777 CHRNA10Q9GZZ6 450 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 OR52A5Q9H2C5 316 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 XKR8Q9H6D3 395 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 ANO10Q9NW15 660 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 PKP3Q9Y446 797 aa10.96□□□□□ -0.65
BRCA1-213ENST00000476777 A0A087X0T9 212 aa10.95□□□□□ -0.66
BRCA1-213ENST00000476777 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
BRCA1-213ENST00000476777 C3orf70A6NLC5 250 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-213ENST00000476777 ZNF487B1APH4 448 aa10.95□□□□□ -0.66
BRCA1-213ENST00000476777 PPP1R12AO14974 1030 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-213ENST00000476777 FAM228BP0C875 321 aa10.95□□□□□ -0.66
BRCA1-213ENST00000476777 ITGAXP20702 1163 aa10.95□□□□□ -0.66
BRCA1-213ENST00000476777 PRLHRP49683 370 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms