RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 NECTIN3Q9NQS3 549 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 PRMT8Q9NR22 394 aaPredicted RBP4.09□□□□□ -1.76
CD55-208ENST00000476590 NUDT15Q9NV35 164 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 PAK1IP1Q9NWT1 392 aaPredicted RBP4.09□□□□□ -1.76
CD55-208ENST00000476590 DUS2Q9NX74 493 aaKnown RBP4.09□□□□□ -1.76
CD55-208ENST00000476590 FBXL12Q9NXK8 326 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 ERAP1Q9NZ08 941 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 COL20A1Q9P218 1284 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 RCOR3Q9P2K3 495 aaPredicted RBP4.09□□□□□ -1.76
CD55-208ENST00000476590 AASSQ9UDR5 926 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 VPS28Q9UK41 221 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 MGAT4AQ9UM21 535 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 ABCG2Q9UNQ0 655 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 BTBD3Q9Y2F9 522 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 DHRS7Q9Y394 339 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.76
CD55-208ENST00000476590 ANKRD36CQ5JPF3 1778 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 UTYO14607 1347 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 SLIT3O75094 1523 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ZFYVE16Q7Z3T8 1539 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 KLF18A0A0U1RQI7 1052 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 MEIOCA2RUB1 952 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TUBAL3A6NHL2 446 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ANKDD1BA6NHY2 528 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 MARCH11A6NNE9 402 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 KBTBD13C9JR72 458 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 E7ENX8 843 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 E7EWF7 191 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 CDC7O00311 574 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 EPHB6O15197 1021 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TCAPO15273 167 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RRP8O43159 456 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 PCDHGA12O60330 932 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 EIF3GO75821 320 aaKnown RBP eCLIP4.08□□□□□ -1.76
CD55-208ENST00000476590 CBR3O75828 277 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 IL18RAPO95256 599 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RASAL1O95294 804 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 POU2F2P09086 479 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 CLTBP09497 229 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 SAGP10523 405 aaPredicted RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 CD1EP15812 388 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 NDUFB7P17568 137 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RPL10P27635 214 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 POU1F1P28069 291 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PPM1AP35813 382 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 CAPGP40121 348 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TOB1P50616 345 aaPredicted RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 CCR9P51686 369 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PLA2G16P53816 162 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PER3P56645 1201 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 KCNK10P57789 538 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 DCAF7P61962 342 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ERVK-25P63136 954 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 NOMO3P69849 1222 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ATP2C1P98194 919 aaPredicted RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 ZNF45Q02386 682 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 GAD2Q05329 585 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 FAAP100Q0VG06 881 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 DMP1Q13316 513 aaPredicted RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 ART3Q13508 389 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 GRAPQ13588 217 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PEX6Q13608 980 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 CTTNQ14247 550 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 SMCO1Q147U7 214 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 NOMO1Q15155 1222 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PTPRRQ15256 657 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ETFDHQ16134 617 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 CYP1B1Q16678 543 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 KCTD19Q17RG1 926 aaPredicted RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 TIGD6Q17RP2 521 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PABPC1L2AQ5JQF8 200 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 MANEAQ5SRI9 462 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 MROH9Q5TGP6 573 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 LIPNQ5VXI9 398 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PTRHD1Q6GMV3 140 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 RAET1GQ6H3X3 334 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TCEAL6Q6IPX3 200 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 SLC25A25Q6KCM7 469 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 MSANTD1Q6ZTZ1 278 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 USP53Q70EK8 1073 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 KDELC2Q7Z4H8 507 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 POLNQ7Z5Q5 900 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RABEPKQ7Z6M1 372 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ZFPM1Q8IX07 1006 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 PLD6Q8N2A8 252 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 SFRP1Q8N474 314 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ZBTB34Q8NCN2 500 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 SETD6Q8TBK2 473 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ELP5Q8TE02 316 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 SFT2D1Q8WV19 159 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RPL3LQ92901 407 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 BIRC7Q96CA5 298 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TMCO6Q96DC7 493 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 TMEM41AQ96HV5 264 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 RILPQ96NA2 401 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 FYTTD1Q96QD9 318 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 DCLRE1CQ96SD1 692 aaKnown RBP4.08□□□□□ -1.76
CD55-208ENST00000476590 PFDN5Q99471 154 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 AGAP2Q99490 1192 aa4.08□□□□□ -1.76
CD55-208ENST00000476590 ACO2Q99798 780 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms