RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 C2orf92A0A1B0GVN3 265 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 DENND3A2RUS2 1198 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 TMEM189-UBE2V1I3L0A0 370 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 UBXN8O00124 270 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 TEX28O15482 410 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SSX5O60225 188 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ATP6V1G1O75348 118 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 RAD51DO75771 328 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 NDUFB4O95168 129 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CLDN7O95471 211 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 OPN1MWP04001 364 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 OPN1MW2P0DN77 364 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 OPN1MW3P0DN78 364 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CD22P20273 847 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 EIF2S3P41091 472 aaKnown RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 NPBWR1P48145 328 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PITPNBP48739 271 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ELLP55199 621 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PROK1P58294 105 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SRP54P61011 504 aaKnown RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ACTR1AP61163 376 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 GCNT1Q02742 428 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF91Q05481 1191 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 FOXF2Q12947 444 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PPP1R8Q12972 351 aaKnown RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 GRIK2Q13002 908 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PLA2G7Q13093 441 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SGCGQ13326 291 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 UBE2V1Q13404 147 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 RAPSNQ13702 412 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 TRADDQ15628 312 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CEBPEQ15744 281 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SMTNL2Q2TAL5 461 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 LRRC38Q5VT99 294 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CES4AQ5XG92 561 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 IRGCQ6NXR0 463 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 NEK5Q6P3R8 708 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PSRC1Q6PGN9 363 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ZNF788Q6ZQV5 615 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CCDC73Q6ZRK6 1079 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 TPRG1Q6ZUI0 275 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 MEPCEQ7L2J0 689 aaKnown RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PRSS42Q7Z5A4 293 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 EXOC3L1Q86VI1 746 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SIAH3Q8IW03 269 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SFTPA2Q8IWL1 248 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 AQP12AQ8IXF9 295 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 MB21D2Q8IYB1 491 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SYN2Q92777 582 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 APBB2Q92870 758 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ORAI1Q96D31 301 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 DTD2Q96FN9 168 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CFAP36Q96G28 342 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CDKN2AIPNLQ96HQ2 116 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CNDP1Q96KN2 507 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SPATA33Q96N06 139 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 FEVQ99581 238 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 TCHPQ9BT92 498 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 B3GNT4Q9C0J1 378 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ISCUQ9H1K1 167 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 RIBC2Q9H4K1 309 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 MAGIXQ9H6Y5 334 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 PALMDQ9NP74 551 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 MKKSQ9NPJ1 570 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CENPMQ9NSP4 180 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS13D-207ENST00000476169 ZNHIT2Q9UHR6 403 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 DMRT1Q9Y5R6 373 aa4.07□□□□□ -1.76
VPS13D-207ENST00000476169 CTAGE9A4FU28 777 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DUXAA6NLW8 204 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 KCNU1A8MYU2 1149 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 KPNA7A9QM74 516 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 J3QR06 171 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 HS3ST1O14792 307 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ATP9AO75110 1047 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 AK1P00568 194 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PLGP00747 810 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 LCATP04180 440 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PRKCGP05129 697 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CTSAP10619 480 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ENO3P13929 434 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CPA3P15088 417 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 TKTP29401 623 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 TIA1P31483 386 aaKnown RBP eCLIP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 SLC6A6P31641 620 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 PIGAP37287 484 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ARHGAP25P42331 645 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 TNNT2P45379 298 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 RGS7P49802 495 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 MAPK12P53778 367 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 MTTPP55157 894 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 CD81P60033 236 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 POLR2LP62875 67 aaKnown RBP4.06□□□□□ -1.76
VPS13D-207ENST00000476169 ID2Q02363 134 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DPTQ07507 201 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 FOXM1Q08050 763 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 FAM27E3Q08E93 113 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 DPYSQ14117 519 aa4.06□□□□□ -1.76
VPS13D-207ENST00000476169 NR1D2Q14995 579 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms