RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 GDF10P55107 478 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CACNG1Q06432 222 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PRKAA1Q13131 559 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 DBN1Q16643 649 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PACS1Q6VY07 963 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FAM71DQ8N9W8 422 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MR1Q95460 341 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ING2Q9H160 280 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PCDHGB7Q9Y5F8 929 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PRSS21Q9Y6M0 314 aa11.87□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TCRBV7S2A1N4TA0A589 114 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SLC5A10A0PJK1 596 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TMEM150CB9EJG8 249 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 BHMG1C9JSJ3 638 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 IFRD1O00458 451 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 HCRTR1O43613 425 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FOXN2P32314 431 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CETN2P41208 172 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 NSG1P42857 185 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PTGIRP43119 386 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PREPP48147 710 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ITGA1P56199 1179 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 KRT33BQ14525 404 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ITIH4Q14624 930 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ZIC1Q15915 447 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ZRANB3Q5FWF4 1079 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 AMIGO1Q86WK6 493 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SYTL1Q8IYJ3 562 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ZBTB2Q8N680 514 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ENDOVQ8N8Q3 282 aaKnown RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 OR2A14Q96R47 310 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 DPH2Q9BQC3 489 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SLC25A23Q9BV35 468 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 VPS37BQ9H9H4 285 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FAM60AQ9NP50 221 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SOHLH2Q9NX45 425 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ACTR10Q9NZ32 417 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SERTAD3Q9UJW9 196 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ICKQ9UPZ9 632 aa11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MDC1Q14676 2089 aaKnown RBP11.86□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 A0A0U1RQJ8 604 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 GSAPA4D1B5 854 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 C2orf74A8MZ97 194 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 LIN7AO14910 233 aaPredicted RBP11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PSMD3O43242 534 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ZNF749O43361 778 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SUN1O94901 812 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 GP1BBP13224 206 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PVRP15151 417 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 GCGRP47871 477 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 LMAN1P49257 510 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CCL11P51671 97 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ACVR1Q04771 509 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CHAF1BQ13112 559 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PRKG2Q13237 762 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 POU6F1Q14863 301 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SPESP1Q6UW49 350 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 OR5AR1Q8NGP9 310 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 OR13J1Q8NGT2 312 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 SGSM3Q96HU1 749 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 HES6Q96HZ4 224 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TMEM121Q9BTD3 319 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 FANCEQ9HB96 536 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 RIMKLBQ9ULI2 386 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MAP4K5Q9Y4K4 846 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PCM1Q15154 2024 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 POLEQ07864 2286 aa11.85□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 CCDC162PA2VCL2 907 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 OR51F1A6NGY5 319 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 QSOX1O00391 747 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TMEM63AO94886 807 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PGDP52209 483 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 NCF4Q15080 339 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 OASLQ15646 514 aaKnown RBP11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 P3H1Q32P28 736 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 NADK2Q4G0N4 442 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 RHBDD2Q6NTF9 364 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 MED25Q71SY5 747 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 TAS2R42Q7RTR8 314 aa11.84□□□□□ -0.51
MSH5-SAPCD1-205ENST00000476085 PEX26Q7Z412 305 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms