RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PHC3Q8NDX5 983 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 TCTN2Q96GX1 697 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
EPCAM-205ENST00000474691 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 HGH1Q9BTY7 390 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 TFB2MQ9H5Q4 396 aaKnown RBP13.38□□□□□ -0.27
EPCAM-205ENST00000474691 COG4Q9H9E3 785 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 ATP13A2Q9NQ11 1180 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 ACTR10Q9NZ32 417 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 SRPK3Q9UPE1 567 aa13.38□□□□□ -0.27
EPCAM-205ENST00000474691 SPTAN1Q13813 2472 aaKnown RBP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 BTN3A3O00478 584 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 CBX6O95503 412 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 LDLRP01130 860 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 MSL3P1P0C860 447 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 RNF224P0DH78 156 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 PVRP15151 417 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 CD151P48509 253 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 CDHR3Q6ZTQ4 885 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 C19orf47Q8N9M1 422 aaKnown RBP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 PROKR1Q8TCW9 393 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 DENND1AQ8TEH3 1009 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 PTERQ96BW5 349 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 MOCOSQ96EN8 888 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 PPP1R2P1Q96PQ5 205 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 QKIQ96PU8 341 aaKnown RBP eCLIP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 APOL2Q9BQE5 337 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 NDC1Q9BTX1 674 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 GBA3Q9H227 469 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 FAM96AQ9H5X1 160 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
EPCAM-205ENST00000474691 USP9YO00507 2555 aaPredicted RBP13.37□□□□□ -0.27
EPCAM-205ENST00000474691 FLNCQ14315 2725 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 GAPDHSO14556 408 aaPredicted RBP13.36□□□□□ -0.27
EPCAM-205ENST00000474691 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
EPCAM-205ENST00000474691 CAPN1P07384 714 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 CBSLP0DN79 551 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 PIM1P11309 404 aaPredicted RBP13.36□□□□□ -0.27
EPCAM-205ENST00000474691 ALAS2P22557 587 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 SHMT2P34897 504 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 CA5AP35218 305 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 CBSP35520 551 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 RPA4Q13156 261 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 SLC9A5Q14940 896 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 GPR33Q49SQ1 333 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 TLDC1Q6P9B6 456 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 NXPE1Q8N323 547 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 OR13C4Q8NGS5 318 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 GBP5Q96PP8 586 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 PITPNM3Q9BZ71 974 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 RUBCNLQ9H714 662 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 NHEJ1Q9H9Q4 299 aaPredicted RBP13.36□□□□□ -0.27
EPCAM-205ENST00000474691 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
EPCAM-205ENST00000474691 TDRKHQ9Y2W6 561 aaKnown RBP13.36□□□□□ -0.27
EPCAM-205ENST00000474691 NOTCH2Q04721 2471 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 RELNP78509 3460 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 ISM1B1AKI9 464 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 F8W8V4 182 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 QSOX1O00391 747 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 ZSCAN9O15535 394 aaPredicted RBP13.35□□□□□ -0.27
EPCAM-205ENST00000474691 CLDN1O95832 211 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 GSTM1P09488 218 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 RBL1P28749 1068 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 MC4RP32245 332 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 CETN2P41208 172 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 GSTM4Q03013 218 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 DEFB110Q30KQ9 67 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 RHBDD2Q6NTF9 364 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 TMTC1Q8IUR5 882 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 CDKL3Q8IVW4 592 aaPredicted RBP13.35□□□□□ -0.27
EPCAM-205ENST00000474691 SLC34A3Q8N130 599 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 ZNF655Q8N720 491 aaPredicted RBP13.35□□□□□ -0.27
EPCAM-205ENST00000474691 OR2Y1Q8NGV0 311 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 DLG3Q92796 817 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 CNDP1Q96KN2 507 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 DNAJC7Q99615 494 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 SPRTNQ9H040 489 aaPredicted RBP13.35□□□□□ -0.27
EPCAM-205ENST00000474691 ZDHHC3Q9NYG2 299 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
EPCAM-205ENST00000474691 POLG2Q9UHN1 485 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 INTUQ9ULD6 942 aa13.35□□□□□ -0.27
EPCAM-205ENST00000474691 hCG_1818297A0A087WSY0 165 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 A0A0J9YY10 115 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 APOC2P02655 101 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 UQCRHP07919 91 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 UGT2B7P16662 529 aa13.34□□□□□ -0.27
EPCAM-205ENST00000474691 AIMP2Q13155 320 aaKnown RBP13.34□□□□□ -0.27
EPCAM-205ENST00000474691 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
EPCAM-205ENST00000474691 ZNF789Q5FWF6 425 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms