RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SNX4O95219 450 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PGRP06401 933 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 EBLN1P0CF75 366 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ARSAP15289 507 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 RPS3P23396 243 aaKnown RBP eCLIP6.01□□□□□ -1.458e-6■■□□□ 12.7
HERC4-209ENST00000473533 MAGEA2P43356 314 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TRPC1P48995 793 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 GP2P55259 537 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 SLC35A2P78381 396 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TIAL1Q01085 375 aaKnown RBP eCLIP6.01□□□□□ -1.45
HERC4-209ENST00000473533 EMX1Q04741 257 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 CLCA4Q14CN2 919 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PON2Q15165 354 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF404Q494X3 552 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TOR1AIP1Q5JTV8 583 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR2T5Q6IEZ7 315 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 Q6ZSR9 355 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 GOLGA7Q7Z5G4 137 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SCD5Q86SK9 330 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZDHHC21Q8IVQ6 265 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF683Q8IZ20 524 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DEPDC4Q8N2C3 294 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PAF1Q8N7H5 531 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 KIAA1958Q8N8K9 716 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 GALNT6Q8NCL4 622 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF540Q8NDQ6 660 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR13C4Q8NGS5 318 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR2T29Q8NH02 315 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR10A6Q8NH74 314 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 C9orf43Q8TAL5 461 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 DYNC2LI1Q8TCX1 351 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TRIB2Q92519 343 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SLC38A4Q969I6 547 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CDCA5Q96FF9 252 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CRELD1Q96HD1 420 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF419Q96HQ0 510 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 PSKH2Q96QS6 385 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CTRCQ99895 268 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 AMBRA1Q9C0C7 1298 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 RACGAP1Q9H0H5 632 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DSN1Q9H410 356 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SOX17Q9H6I2 414 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 LRTM1Q9HBL6 345 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NUDT5Q9UKK9 219 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ST3GAL5Q9UNP4 418 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DHRS7Q9Y394 339 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PCDHB5Q9Y5E4 795 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DGKBQ9Y6T7 804 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CASTOR2A6NHX0 329 aa6□□□□□ -1.45
HERC4-209ENST00000473533 LRRC14BA6NHZ5 514 aa6□□□□□ -1.45
HERC4-209ENST00000473533 C9JVG2 144 aa6□□□□□ -1.45
HERC4-209ENST00000473533 INSIG1O15503 277 aa6□□□□□ -1.45
HERC4-209ENST00000473533 JRKO75564 520 aa6□□□□□ -1.45
HERC4-209ENST00000473533 MT-ND1P03886 318 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KRT8P05787 483 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PABPC1P11940 636 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 PCNAP12004 261 aa6□□□□□ -1.45
HERC4-209ENST00000473533 EFNA1P20827 205 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 MAPK10P53779 464 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RPL38P63173 70 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 SELPLGQ14242 412 aa6□□□□□ -1.45
HERC4-209ENST00000473533 FAM110CQ1W6H9 321 aa6□□□□□ -1.45
HERC4-209ENST00000473533 LRIF1Q5T3J3 769 aa6□□□□□ -1.45
HERC4-209ENST00000473533 UBE2UQ5VVX9 321 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KIAA1614Q5VZ46 1190 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PNCKQ6P2M8 343 aa6□□□□□ -1.45
HERC4-209ENST00000473533 MFSD4AQ8N468 514 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OR4K2Q8NGD2 314 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OR2T11Q8NH01 316 aa6□□□□□ -1.45
HERC4-209ENST00000473533 C17orf50Q8WW18 174 aa6□□□□□ -1.45
HERC4-209ENST00000473533 GTF2H4Q92759 462 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PROX1Q92786 737 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OR52E6Q96RD3 313 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ZNF300Q96RE9 604 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 CSF3RQ99062 836 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RTP3Q9BQQ7 232 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CLPBQ9H078 707 aa6□□□□□ -1.45
HERC4-209ENST00000473533 CLMPQ9H6B4 373 aa6□□□□□ -1.45
HERC4-209ENST00000473533 REEP1Q9H902 201 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SMURF2Q9HAU4 748 aa6□□□□□ -1.45
HERC4-209ENST00000473533 RNF19AQ9NV58 838 aa6□□□□□ -1.45
HERC4-209ENST00000473533 NDFIP2Q9NV92 336 aa6□□□□□ -1.45
HERC4-209ENST00000473533 TMEM30AQ9NV96 361 aa6□□□□□ -1.45
HERC4-209ENST00000473533 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
HERC4-209ENST00000473533 TESMINQ9Y4I5 508 aa6□□□□□ -1.45
HERC4-209ENST00000473533 OARD1Q9Y530 152 aa6□□□□□ -1.45
HERC4-209ENST00000473533 NCF1BA6NI72 391 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 NCF1CA8MVU1 366 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 EFCAB9A8MZ26 197 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ADM5C9JUS6 153 aa6□□□□□ -1.45
HERC4-209ENST00000473533 EIF3FO00303 357 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 PDHXO00330 501 aa6□□□□□ -1.45
HERC4-209ENST00000473533 PPP6CO00743 305 aa6□□□□□ -1.45
HERC4-209ENST00000473533 SNPHO15079 494 aa6□□□□□ -1.45
HERC4-209ENST00000473533 ANKRD28O15084 1053 aa6□□□□□ -1.45
HERC4-209ENST00000473533 MYO1DO94832 1006 aa6□□□□□ -1.45
HERC4-209ENST00000473533 HAPLN1P10915 354 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 NCF1P14598 390 aaPredicted RBP6□□□□□ -1.45
HERC4-209ENST00000473533 POLR2EP19388 210 aaKnown RBP6□□□□□ -1.45
HERC4-209ENST00000473533 HOXC8P31273 242 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms