RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 OR52A5Q9H2C5 316 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 CCDC68Q9H2F9 335 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 XKR8Q9H6D3 395 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 POLG2Q9UHN1 485 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 SNX12Q9UMY4 172 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
CPNE1-222ENST00000473373 TCRBV7S3A2A0A539 114 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 PIPSLA2A3N6 862 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 ZNF891A8MT65 544 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 IQCF5A8MTL0 148 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 ISM1B1AKI9 464 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 GOLGA8KD6RF30 607 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 GOLGA8TH3BQL2 631 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 KPNA5O15131 536 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 ZNF185O15231 689 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 KATNA1O75449 491 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 MT-ND3P03897 115 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 PRKAR1AP10644 381 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 LIFP15018 202 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 SHMT2P34897 504 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 DHX34Q14147 1143 aaKnown RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 SEMA3AQ14563 771 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 RNF187Q5TA31 235 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 C16orf46Q6P387 395 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 TTC27Q6P3X3 843 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 OTOAQ7RTW8 1153 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 TBC1D21Q8IYX1 336 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 UNC5BQ8IZJ1 945 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 KRT222Q8N1A0 295 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 MPP5Q8N3R9 675 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 RAB42Q8N4Z0 105 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 GALNT6Q8NCL4 622 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 GABPB2Q8TAK5 448 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 ACTRT1Q8TDG2 376 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 KLHL6Q8WZ60 621 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 MFSD3Q96ES6 412 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 MRM3Q9HC36 420 aaKnown RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
CPNE1-222ENST00000473373 FGF21Q9NSA1 209 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 PILRAQ9UKJ1 303 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 SLC39A10Q9ULF5 831 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 PLAGL1Q9UM63 463 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 SOX13Q9UN79 622 aa11.2□□□□□ -0.62
CPNE1-222ENST00000473373 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 MGAQ8IWI9 3026 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 SLC9B1P1A6NJY1 282 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 SDR42E2A6NKP2 422 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 BTN3A1O00481 513 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 AVILO75366 819 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 SPAG6O75602 509 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CHRM3P20309 590 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 FMO4P31512 558 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 DLSTP36957 453 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 FNTAP49354 379 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 KPNA2P52292 529 aaKnown RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CYP4F2P78329 520 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 MC1RQ01726 317 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 ACVR1Q04771 509 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 ABRQ12979 859 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 KCNJ11Q14654 390 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 GPR19Q15760 415 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 ZNF534Q76KX8 674 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 LRRC6Q86X45 466 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 KLHL7Q8IXQ5 586 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 PPIL6Q8IXY8 311 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 OR5K2Q8NHB8 316 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 EXTL1Q92935 676 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CLIP3Q96DZ5 547 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CARD6Q9BX69 1037 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 KLHL25Q9H0H3 589 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 DDX47Q9H0S4 455 aaKnown RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 C1GALT1Q9NS00 363 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 SIDT1Q9NXL6 827 aaKnown RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 ACTR10Q9NZ32 417 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 MARCH4Q9P2E8 410 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 POMT2Q9UKY4 750 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 TMEM184BQ9Y519 407 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-222ENST00000473373 MRFAP1Q9Y605 127 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
CPNE1-222ENST00000473373 LOC101059948A0A1B0GTJ6 334 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 MAGEB16A2A368 324 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 USP27XA6NNY8 438 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 B8ZZF3 427 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 CES2O00748 559 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 SCRG1O75711 98 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 NTRK1P04629 796 aa11.18□□□□□ -0.62
CPNE1-222ENST00000473373 KLK3P07288 261 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms