RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PRLHRP49683 370 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ZNF75DP51815 510 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 RRADP55042 308 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 FANCCQ00597 558 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 CDSNQ15517 529 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 DENND5AQ6IQ26 1287 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 RHBDD2Q6NTF9 364 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ARMC6Q6NXE6 501 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 IGFL2Q6UWQ7 119 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 RAB43Q86YS6 212 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 HPS6Q86YV9 775 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 RFX6Q8HWS3 928 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 MCEMP1Q8IX19 187 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ZNF655Q8N720 491 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ACVR1CQ8NER5 493 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 OR2Y1Q8NGV0 311 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 SLC35G2Q8TBE7 412 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ZFPM2Q8WW38 1151 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
MCF2L-223ENST00000473345 FCRL5Q96RD9 977 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 FERD3LQ96RJ6 166 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 FICDQ9BVA6 458 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 SRMSQ9H3Y6 488 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 TRABDQ9H4I3 376 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 TFB2MQ9H5Q4 396 aaKnown RBP9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ASB8Q9H765 288 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 UVRAGQ9P2Y5 699 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ACSL5Q9ULC5 683 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 PLAGL1Q9UM63 463 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 ENTPD4Q9Y227 616 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 PRSS21Q9Y6M0 314 aa9.28□□□□□ -0.92
MCF2L-223ENST00000473345 PPP1R12AO14974 1030 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 NRP2O60462 931 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 KLHL18O94889 574 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SLC35G4P0C7Q5 338 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 TNNT1P13805 278 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 TDGF1P3P51864 188 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 ZNF140P52738 457 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 KCNK10P57789 538 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 ZBED6P86452 979 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 BOP1Q14137 746 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 NKAIN1Q4KMZ8 207 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 ZNF324BQ6AW86 544 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SPESP1Q6UW49 350 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 KIRREL2Q6UWL6 708 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 RANBP10Q6VN20 620 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 UNC5AQ6ZN44 842 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SHISA6Q6ZSJ9 500 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 ZC3H18Q86VM9 953 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 AMIGO1Q86WK6 493 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 PIANPQ8IYJ0 282 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SHISA5Q8N114 240 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 CLDN19Q8N6F1 224 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 C19orf47Q8N9M1 422 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 OR5AR1Q8NGP9 310 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 HM13Q8TCT9 377 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 PHF12Q96QT6 1004 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 TAAR6Q96RI8 345 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SPSB2Q99619 263 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 CHP1Q99653 195 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 SLX1AQ9BQ83 275 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 WDR77Q9BQA1 342 aaPredicted RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 XPO4Q9C0E2 1151 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 HAUS2Q9NVX0 235 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 FBXL4Q9UKA2 621 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 BZW2Q9Y6E2 419 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 PCM1Q15154 2024 aa9.27□□□□□ -0.93
MCF2L-223ENST00000473345 MDC1Q14676 2089 aaKnown RBP9.27□□□□□ -0.93
MCF2L-223ENST00000473345 IGLV3-16A0A075B6K0 115 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 C9J4A7 227 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 AGPSO00116 658 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 STX7O15400 261 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 HNRNPRO43390 633 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 CST8O60676 142 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 OR2B3O76000 313 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 STSP08842 583 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 H2AFZP0C0S5 128 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 TMEM253P0C7T8 217 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 MCM3P25205 808 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ACADLP28330 430 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 HADHAP40939 763 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 FOLR3P41439 243 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 EFNA3P52797 238 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 KRTAP10-9P60411 292 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 PRKAA1Q13131 559 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 TAF1AQ15573 450 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 SLC18A3Q16572 532 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 FILIP1LQ4L180 1135 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 LYPLAL1Q5VWZ2 237 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 KAZNQ674X7 775 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 H2AFVQ71UI9 128 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 PID1Q7Z2X4 250 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 FJX1Q86VR8 437 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 VSIG1Q86XK7 387 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 NXPE1Q8N323 547 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms