RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 AP2A1O95782 977 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 PVRP15151 417 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 RORAP35398 523 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 CD97P48960 835 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 CCL11P51671 97 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 SRSF1Q07955 248 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL9A3-210ENST00000472880 PIANPQ8IYJ0 282 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 N4BP2L2Q92802 583 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-210ENST00000472880 TRAPPC9Q96Q05 1148 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 NRTNQ99748 197 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 PCMTD2Q9NV79 361 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 TCFL5Q9UL49 500 aa19.15■□□□□ 0.66
COL9A3-210ENST00000472880 PACSIN2Q9UNF0 486 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-210ENST00000472880 CCDC78A2IDD5 438 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 E7EQ34 232 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 FTH1P02794 183 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 MSNP26038 577 aaKnown RBP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 SHMT2P34897 504 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 NSG1P42857 185 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 GDF10P55107 478 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ITGA1P56199 1179 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 KLF1Q13351 362 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ITIH4Q14624 930 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 SYTL3Q4VX76 610 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ZNF789Q5FWF6 425 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 LCN10Q6JVE6 187 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 SPESP1Q6UW49 350 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 FAM198BQ6UWH4 519 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 LINC00523Q86TU6 105 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ADGRF3Q8IZF5 1079 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 TXLNBQ8N3L3 684 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 FAM26EQ8N5C1 309 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 TAB3Q8N5C8 712 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 EFCAB3Q8N7B9 438 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ADAMTS17Q8TE56 1095 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ELMO1Q92556 727 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 TMEM121Q9BTD3 319 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 G3BP2Q9UN86 482 aaKnown RBP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ICKQ9UPZ9 632 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 ASF1AQ9Y294 204 aa19.14■□□□□ 0.65
COL9A3-210ENST00000472880 R3HDM2Q9Y2K5 976 aaKnown RBP19.14■□□□□ 0.65
COL9A3-210ENST00000472880 CLEC18AA5D8T8 446 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 TTLL8A6PVC2 850 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 C9J4A7 227 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 FTCDO95954 541 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 HBQ1P09105 142 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 PTCHD3Q3KNS1 767 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 CLEC18BQ6UXF7 455 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 CDHR3Q6ZTQ4 885 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 GPR135Q8IZ08 494 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 CLEC18CQ8NCF0 446 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 OR5AR1Q8NGP9 310 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 SLC35B2Q8TB61 432 aa19.13■□□□□ 0.65
COL9A3-210ENST00000472880 DPH2Q9BQC3 489 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-210ENST00000472880 TNRC6AQ8NDV7 1962 aaKnown RBP19.12■□□□□ 0.65
COL9A3-210ENST00000472880 MROH6A6NGR9 719 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 ZNF749O43361 778 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 TMEM63AO94886 807 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 GAS8O95995 478 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 AGXTP21549 392 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 KIF5AQ12840 1032 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 BRD3Q15059 726 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 NCF4Q15080 339 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 FAM69BQ5VUD6 431 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 PACS1Q6VY07 963 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 C19orf47Q8N9M1 422 aaKnown RBP19.12■□□□□ 0.65
COL9A3-210ENST00000472880 DNAAF3Q8N9W5 541 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 BAG1Q99933 345 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-210ENST00000472880 PADI2Q9Y2J8 665 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 ZNF451Q9Y4E5 1061 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 PRSS21Q9Y6M0 314 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 FLNCQ14315 2725 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 MAST4O15021 2626 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 DOPEY2Q9Y3R5 2298 aa19.12■□□□□ 0.65
COL9A3-210ENST00000472880 OR51F1A6NGY5 319 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 VPS4BO75351 444 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 CAPN1P07384 714 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 OR56A5P0C7T3 313 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 UGT2B7P16662 529 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 FOXN2P32314 431 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 CDH17Q12864 832 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 CCDC38Q502W7 563 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 PAPD7Q5XG87 772 aaKnown RBP19.11■□□□□ 0.65
COL9A3-210ENST00000472880 TRIM73Q86UV7 250 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 RAB43Q86YS6 212 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 TBC1D21Q8IYX1 336 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 OR52K1Q8NGK4 314 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 CPT1CQ8TCG5 803 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 MLXIPLQ9NP71 852 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 POLG2Q9UHN1 485 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 VPS4AQ9UN37 437 aa19.11■□□□□ 0.65
COL9A3-210ENST00000472880 TDRKHQ9Y2W6 561 aaKnown RBP19.11■□□□□ 0.65
COL9A3-210ENST00000472880 NBASA2RRP1 2371 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 TCRBV7S2A1N4TA0A589 114 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 CCDC162PA2VCL2 907 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 ERI2A8K979 691 aaKnown RBP19.1■□□□□ 0.65
COL9A3-210ENST00000472880 F8W8V4 182 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 KDM1AO60341 852 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 CHRM5P08912 532 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms