RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 OC90Q02509 493 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 DOC2BQ14184 412 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 VAX1Q5SQQ9 334 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 RRAGBQ5VZM2 374 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 VASNQ6EMK4 673 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 RWDD4Q6NW29 188 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 PLEKHM3Q6ZWE6 761 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 COX15Q7KZN9 410 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 SRLQ86TD4 932 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 SLC20A1Q8WUM9 679 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 FAXDC2Q96IV6 333 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 EPSTI1Q96J88 318 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 DACH2Q96NX9 599 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 OLFM1Q99784 485 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 RIOK2Q9BVS4 552 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 TM6SF1Q9BZW5 370 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CARD9Q9H257 536 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 DEF6Q9H4E7 631 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 ARFGAP3Q9NP61 516 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CGNQ9P2M7 1197 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 NXT1Q9UKK6 140 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 POMT2Q9UKY4 750 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CNOT6Q9ULM6 557 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 SH3D21A4FU49 640 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 FAM157AC9JC47 383 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 TRAFD1O14545 582 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 HCRTR1O43613 425 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 PIM1P11309 404 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 CYP2A6P11509 494 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 HNF1AP20823 631 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 UGT1A1P22309 533 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 IDUAP35475 653 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 GPD2P43304 727 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 KLC1Q07866 573 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 PRKAA1Q13131 559 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 CUL2Q13617 745 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 AAMPQ13685 434 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 SLC5A12Q1EHB4 618 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 RILPL1Q5EBL4 403 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ACER2Q5QJU3 275 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF648Q5T619 568 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 FAM102AQ5T9C2 384 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 DIEXFQ68CQ4 756 aaKnown RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 SHC4Q6S5L8 630 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM270Q6UE05 265 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 SHISA2Q6UWI4 295 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 TTLL10Q6ZVT0 673 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 PLCD4Q9BRC7 762 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 OR2AG1Q9H205 316 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 SLC26A1Q9H2B4 701 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 KCTD10Q9H3F6 313 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 RIC8BQ9NVN3 520 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ZFATQ9P243 1243 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ATXN10Q9UBB4 475 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 PPARGC1AQ9UBK2 798 aaKnown RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 CCDC39Q9UFE4 941 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 C3orf18Q9UK00 162 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ING1Q9UK53 422 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ADGRG1Q9Y653 693 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 ROS1P08922 2347 aa6.24□□□□□ -1.41
HDAC3-206ENST00000471968 IGHV1-45A0A0A0MS14 117 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 FAM47E-STBD1D6RA91 191 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 RNF225M0QZC1 329 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 PIN1P1O15428 100 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 KIAA0513O60268 411 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 HSF2BPO75031 334 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ADAM11O75078 769 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 NEURL1O76050 574 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 SUN1O94901 812 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 PAEPP09466 180 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF7P17097 686 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 TPH1P17752 444 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 HLA-DPA1P20036 260 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ACVR1BP36896 505 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 STILQ15468 1287 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ETFDHQ16134 617 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 RPE65Q16518 533 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 KNOP1Q1ED39 458 aaKnown RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 AWAT1Q58HT5 328 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 C1orf185Q5T7R7 199 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ACBD5Q5T8D3 534 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 RIPPLY2Q5TAB7 128 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 GARNL3Q5VVW2 1013 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 WASH2PQ6VEQ5 465 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 NLRP14Q86W24 1093 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 METTL27Q8N6F8 245 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 HORMAD2Q8N7B1 307 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 TSEN2Q8NCE0 465 aaKnown RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ZFAND2BQ8WV99 257 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 IGFBPL1Q8WX77 278 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 PIK3IP1Q96FE7 263 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 DEFB127Q9H1M4 99 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM8AQ9HCN3 771 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 FAM60AQ9NP50 221 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 PLSCR2Q9NRY7 297 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 IMP3Q9NV31 184 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms