RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 MUC13Q9H3R2 512 aa3.22□□□□□ -1.89
RBM39-228ENST00000471635 RHCGQ9UBD6 479 aa3.22□□□□□ -1.89
RBM39-228ENST00000471635 EPHA6Q9UF33 1036 aa3.22□□□□□ -1.89
RBM39-228ENST00000471635 FBXL17Q9UF56 701 aa3.22□□□□□ -1.89
RBM39-228ENST00000471635 AMACRQ9UHK6 382 aa3.22□□□□□ -1.89
RBM39-228ENST00000471635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.22□□□□□ -1.89
RBM39-228ENST00000471635 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.89
RBM39-228ENST00000471635 A0A1W2PNU3 283 aaPredicted RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 MEX3AA1L020 520 aaKnown RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 FRMD3A2A2Y4 597 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 MSGN1A6NI15 193 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 MYO1GB0I1T2 1018 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 DDX58O95786 925 aaKnown RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 TBX18O95935 607 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 CAPN2P17655 700 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 CCR10P46092 362 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 B3GALT5-AS1P59052 145 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 RIGQ13278 110 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 RAPSNQ13702 412 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 KRT33BQ14525 404 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 MELKQ14680 651 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 FAM98BQ52LJ0 330 aaKnown RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 TAF1BQ53T94 588 aaPredicted RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 MDH1BQ5I0G3 518 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 TMEM154Q6P9G4 183 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 LINGO4Q6UY18 593 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 GPRIN3Q6ZVF9 776 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 PTAR1Q7Z6K3 402 aaPredicted RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 HOGA1Q86XE5 327 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 ERLEC1Q96DZ1 483 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 NSMCE3Q96MG7 304 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 C7orf26Q96N11 449 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 FOXN4Q96NZ1 517 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 GPATCH1Q9BRR8 931 aaKnown RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 VN1R1Q9GZP7 353 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 ATP13A3Q9H7F0 1226 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 SDR39U1Q9NRG7 319 aaPredicted RBP3.21□□□□□ -1.9
RBM39-228ENST00000471635 ZDHHC2Q9UIJ5 367 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 ANGPTL3Q9Y5C1 460 aa3.21□□□□□ -1.9
RBM39-228ENST00000471635 RUSC2Q8N2Y8 1516 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 A0A1W2PR77 199 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 GAPDHSO14556 408 aaPredicted RBP3.2□□□□□ -1.9
RBM39-228ENST00000471635 NPHP1O15259 732 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 OR2C1O95371 312 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 CLTBP09497 229 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 GABRB1P18505 474 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 MMP12P39900 470 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 OPRL1P41146 370 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 PDX1P52945 283 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 GSDMDP57764 484 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 KLHL26Q53HC5 615 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 WLSQ5T9L3 541 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 ZNF343Q6P1L6 599 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 FIP1L1Q6UN15 594 aaKnown RBP3.2□□□□□ -1.9
RBM39-228ENST00000471635 IKBIPQ70UQ0 350 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 NIPA2Q8N8Q9 360 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 NAXEQ8NCW5 288 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 MORC4Q8TE76 937 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 ARHGAP45Q92619 1136 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 AZIN2Q96A70 460 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 USP28Q96RU2 1077 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 C16orf70Q9BSU1 422 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 S1PR5Q9H228 398 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 ARRDC1-AS1Q9H2J1 176 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 CHMP1AQ9HD42 196 aaPredicted RBP3.2□□□□□ -1.9
RBM39-228ENST00000471635 OSER1Q9NX31 292 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 NUDT4Q9NZJ9 180 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 ORC3Q9UBD5 711 aaPredicted RBP3.2□□□□□ -1.9
RBM39-228ENST00000471635 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.2□□□□□ -1.9
RBM39-228ENST00000471635 TP53TG3Q9ULZ0 132 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 PPP1R3CQ9UQK1 317 aa3.2□□□□□ -1.9
RBM39-228ENST00000471635 HYKKA2RU49 373 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 SSX4O60224 188 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 RB1P06400 928 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 PRLRP16471 622 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 CA6P23280 308 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 ARL3P36405 182 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 CDH8P55286 799 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 COX10Q12887 443 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 KCNC3Q14003 757 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 Q6ZRP5 223 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 INTS8Q75QN2 995 aaKnown RBP3.19□□□□□ -1.9
RBM39-228ENST00000471635 CHST9Q7L1S5 443 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 CFAP206Q8IYR0 622 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 MARVELD2Q8N4S9 558 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 WDTC1Q8N5D0 677 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 PPFIBP2Q8ND30 876 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 OR13J1Q8NGT2 312 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 UCMAQ8WVF2 138 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 CENPTQ96BT3 561 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 PPM1MQ96MI6 270 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 OR6C1Q96RD1 312 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 KRT12Q99456 494 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 PGAP2Q9UHJ9 254 aa3.19□□□□□ -1.9
RBM39-228ENST00000471635 MAGEC1O60732 1142 aa3.18□□□□□ -1.9
RBM39-228ENST00000471635 EIF3JO75822 258 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms