RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MDM1Q8TC05 714 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 JPH3Q8WXH2 748 aaPredicted RBP14.87□□□□□ -0.03
SDC3-203ENST00000471567 C9orf72Q96LT7 481 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
SDC3-203ENST00000471567 SLC46A1Q96NT5 459 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 CD180Q99467 661 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 AARSD1Q9BTE6 412 aaKnown RBP14.87□□□□□ -0.03
SDC3-203ENST00000471567 SRMSQ9H3Y6 488 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 HRASLS2Q9NWW9 162 aa14.87□□□□□ -0.03
SDC3-203ENST00000471567 DMGDHQ9UI17 866 aaKnown RBP14.87□□□□□ -0.03
SDC3-203ENST00000471567 CORO1CQ9ULV4 474 aaPredicted RBP14.87□□□□□ -0.03
SDC3-203ENST00000471567 OR6C74A6NCV1 312 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 MATN2O00339 956 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 BRINP1O60477 761 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 VPS26AO75436 327 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ITGA2BP08514 1039 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 JMJD7P0C870 316 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 CD9P21926 228 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 SKIV2L2P42285 1042 aaKnown RBP14.86□□□□□ -0.03
SDC3-203ENST00000471567 MAGEA4P43358 317 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 GFERP55789 205 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ERVPABLB-1P60509 514 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ABRQ12979 859 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 PRKG2Q13237 762 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 SNAP47Q5SQN1 464 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 UGT3A1Q6NUS8 523 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ARMC6Q6NXE6 501 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 CEP128Q6ZU80 1094 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 NEK10Q6ZWH5 1172 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 PRSS42Q7Z5A4 293 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 SLC26A11Q86WA9 606 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 RCBTB1Q8NDN9 531 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 OR4E2Q8NGC2 313 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ZCCHC14Q8WYQ9 949 aaKnown RBP14.86□□□□□ -0.03
SDC3-203ENST00000471567 INPP5DQ92835 1189 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 FOPNLQ96NB1 174 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 TGM7Q96PF1 710 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 HGH1Q9BTY7 390 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 B3GNT4Q9C0J1 378 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 TSPYL1Q9H0U9 437 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ASCL3Q9NQ33 180 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 NSMCE4AQ9NXX6 385 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 ZFATQ9P243 1243 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 SEMA5BQ9P283 1151 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 GALPQ9UBC7 116 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 MED16Q9Y2X0 877 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 DHRS7Q9Y394 339 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 KIF26BQ2KJY2 2108 aa14.86□□□□□ -0.03
SDC3-203ENST00000471567 A8MU76 341 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 EIF3FO00303 357 aaPredicted RBP14.85□□□□□ -0.03
SDC3-203ENST00000471567 TNFSF15O95150 251 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 F7P08709 466 aaPredicted RBP14.85□□□□□ -0.03
SDC3-203ENST00000471567 SSTR1P30872 391 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 SHMT2P34897 504 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 PRKAA1Q13131 559 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 TBC1D25Q3MII6 688 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 IRGCQ6NXR0 463 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 TTC23LQ6PF05 361 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 FOXR1Q6PIV2 292 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 C3orf62Q6ZUJ4 267 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 AMIGO1Q86WK6 493 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 CCDC25Q86WR0 208 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 DCUN1D3Q8IWE4 304 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 CARFQ8N187 725 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 UBXN4Q92575 508 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 THSD1Q9NS62 852 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 TAS2R13Q9NYV9 303 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 PISDQ9UG56 409 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 MTRF1LQ9UGC7 380 aaKnown RBP14.85□□□□□ -0.03
SDC3-203ENST00000471567 KLHL3Q9UH77 587 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 PCDHGA7Q9Y5G6 932 aa14.85□□□□□ -0.03
SDC3-203ENST00000471567 PMS2P1A4D2B8 440 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CDRT15L2A8MXV6 281 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 B4E171 279 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 ZNF500O60304 480 aaPredicted RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 SPAG6O75602 509 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 MATN4O95460 622 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CBSLP0DN79 551 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 ENO3P13929 434 aaPredicted RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 CBSP35520 551 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CCNFP41002 786 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 TSPAN7P41732 249 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 KYNUQ16719 465 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 ACSBG2Q5FVE4 666 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 DNTTIP2Q5QJE6 756 aaKnown RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 CACHD1Q5VU97 1274 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CLEC14AQ86T13 490 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 PROSER1Q86XN7 944 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 SIDT2Q8NBJ9 832 aaKnown RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 CFAP61Q8NHU2 1237 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CD200R1Q8TD46 325 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 MAGEC3Q8TD91 643 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 SKA2Q8WVK7 121 aaPredicted RBP14.84□□□□□ -0.03
SDC3-203ENST00000471567 KLHL6Q8WZ60 621 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 CDKL2Q92772 493 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 FGF11Q92914 225 aa14.84□□□□□ -0.03
SDC3-203ENST00000471567 RAD51AP1Q96B01 352 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms