RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 RBM20Q5T481 1227 aaKnown RBP13.36□□□□□ -0.27
LINC00173-201ENST00000470091 NKAIN2Q5VXU1 208 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 TTC19Q6DKK2 380 aaPredicted RBP13.36□□□□□ -0.27
LINC00173-201ENST00000470091 RAET1GQ6H3X3 334 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 MRNIPQ6NTE8 343 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 FAM151BQ6UXP7 276 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SH2D5Q6ZV89 423 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SLITRK4Q8IW52 837 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 LMNTD2Q8IXW0 634 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 BANPQ8N9N5 519 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 RCBTB1Q8NDN9 531 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 ISL2Q96A47 359 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SGF29Q96ES7 293 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 DTD2Q96FN9 168 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 NUDT22Q9BRQ3 303 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 ARHGAP9Q9BRR9 750 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 TEX101Q9BY14 249 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 CAB39LQ9H9S4 337 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SSU72Q9NP77 194 aaKnown RBP13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SNX15Q9NRS6 342 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 SLC39A10Q9ULF5 831 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 ST14Q9Y5Y6 855 aa13.36□□□□□ -0.27
LINC00173-201ENST00000470091 ZNF106Q9H2Y7 1883 aaKnown RBP13.36□□□□□ -0.27
LINC00173-201ENST00000470091 LRP4O75096 1905 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 HECTD1Q9ULT8 2610 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 C9orf172C9J069 976 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 SLC28A2O43868 658 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 TYROBPO43914 113 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 CPNE6O95741 557 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 LIPCP11150 499 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 SAT1P21673 171 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 GMPRP36959 345 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 SPAM1P38567 509 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 MAGEA12P43365 314 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 GPR1P46091 355 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 LEPRP48357 1165 aaKnown RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 CYP4F2P78329 520 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 CDK3Q00526 305 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 TYSND1Q2T9J0 566 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 LINC00303Q3SY05 128 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 ZNF574Q6ZN55 896 aaPredicted RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 PRICKLE2Q7Z3G6 844 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 GALNT7Q86SF2 657 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 PIANPQ8IYJ0 282 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 CBARPQ8N350 705 aaPredicted RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 ALKBH8Q96BT7 664 aaKnown RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 NDNQ99608 321 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 C12orf65Q9H3J6 166 aaKnown RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 MLXIPLQ9NP71 852 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 TRNAU1APQ9NX07 287 aaKnown RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
LINC00173-201ENST00000470091 ADAM21Q9UKJ8 722 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 SLC30A1Q9Y6M5 507 aa13.35□□□□□ -0.27
LINC00173-201ENST00000470091 GLYATL1P3A0A0U1RQE8 302 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 COPEO14579 308 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 PRAMEF1O95521 474 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 ZNF30P17039 623 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 WT1P19544 449 aaPredicted RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 NFKBIAP25963 317 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 CD1CP29017 333 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 TYK2P29597 1187 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 RPA3P35244 121 aaPredicted RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 MDH1P40925 334 aaKnown RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 PGGT1BP53609 377 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 PTSQ03393 145 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 CACNG1Q06432 222 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 USP10Q14694 798 aaKnown RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 CHRNA6Q15825 494 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 TAS2R42Q7RTR8 314 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 SDCCAG8Q86SQ7 713 aaPredicted RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 CAPS2Q9BXY5 557 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 VPS11Q9H270 941 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 IL26Q9NPH9 171 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 INTS10Q9NVR2 710 aaKnown RBP13.34□□□□□ -0.27
LINC00173-201ENST00000470091 MKS1Q9NXB0 559 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 KCTD5Q9NXV2 234 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 SLC17A7Q9P2U7 560 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 COL12A1Q99715 3063 aa13.34□□□□□ -0.27
LINC00173-201ENST00000470091 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.28
LINC00173-201ENST00000470091 UBA6A0AVT1 1052 aaPredicted RBP13.33□□□□□ -0.28
LINC00173-201ENST00000470091 PPM1DO15297 605 aa13.33□□□□□ -0.28
LINC00173-201ENST00000470091 NDUFS3O75489 264 aa13.33□□□□□ -0.28
LINC00173-201ENST00000470091 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
LINC00173-201ENST00000470091 FAM87AP0C7U9 286 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms