RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 QSOX1O00391 747 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 LIN7AO14910 233 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-208ENST00000470076 DDX3YO15523 660 aaKnown RBP16.95■□□□□ 0.3
COL7A1-208ENST00000470076 METTL18O95568 372 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 AP2A1O95782 977 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 PRSS56P0CW18 603 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 TPH1P17752 444 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 NSG1P42857 185 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 DBN1Q16643 649 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 ZNF789Q5FWF6 425 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 PIANPQ8IYJ0 282 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 ADGRF3Q8IZF5 1079 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 SYCE1Q8N0S2 351 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 ACRBPQ8NEB7 543 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 ADAMTS17Q8TE56 1095 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 TRAPPC9Q96Q05 1148 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 DPH2Q9BQC3 489 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-208ENST00000470076 HGH1Q9BTY7 390 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 PCMTD2Q9NV79 361 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 SMARCAL1Q9NZC9 954 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 TCFL5Q9UL49 500 aa16.95■□□□□ 0.3
COL7A1-208ENST00000470076 HBQ1P09105 142 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 PSMA3P25788 255 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 PTGIRP43119 386 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 LMAN1P49257 510 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 CCL11P51671 97 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 ITGA1P56199 1179 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 CHAF1BQ13112 559 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 PRKG2Q13237 762 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 KLF1Q13351 362 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-208ENST00000470076 ITIH4Q14624 930 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 PAPD7Q5XG87 772 aaKnown RBP16.94■□□□□ 0.3
COL7A1-208ENST00000470076 LCN10Q6JVE6 187 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 KIAA1328Q86T90 577 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 LINC00523Q86TU6 105 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 HOOK3Q86VS8 718 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 SYTL1Q8IYJ3 562 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 FAM26EQ8N5C1 309 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 SLC35B2Q8TB61 432 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL7A1-208ENST00000470076 SLC7A5P2Q9GIP4 190 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 ACTR10Q9NZ32 417 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 PCDHGB7Q9Y5F8 929 aa16.94■□□□□ 0.3
COL7A1-208ENST00000470076 SPTBN1Q01082 2364 aaKnown RBP16.94■□□□□ 0.3
COL7A1-208ENST00000470076 MROH6A6NGR9 719 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 TTLL8A6PVC2 850 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 E7EQ34 232 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 TMEM63AO94886 807 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 FTH1P02794 183 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 CAPN1P07384 714 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 PVRP15151 417 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 MSNP26038 577 aaKnown RBP16.93■□□□□ 0.3
COL7A1-208ENST00000470076 SHMT2P34897 504 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 SPESP1Q6UW49 350 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 FAM198BQ6UWH4 519 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 PACS1Q6VY07 963 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 CDHR3Q6ZTQ4 885 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 GPR135Q8IZ08 494 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 TXLNBQ8N3L3 684 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 NRTNQ99748 197 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 TMEM121Q9BTD3 319 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 XKR8Q9H6D3 395 aa16.93■□□□□ 0.3
COL7A1-208ENST00000470076 G3BP2Q9UN86 482 aaKnown RBP16.93■□□□□ 0.3
COL7A1-208ENST00000470076 ERI2A8K979 691 aaKnown RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 C9J4A7 227 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 ZNF749O43361 778 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 CEACAM4O75871 244 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 AGXTP21549 392 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 GDF10P55107 478 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 PLOD1Q02809 727 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 KIF5AQ12840 1032 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 NCF4Q15080 339 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 MICALCLQ6ZW33 695 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 MED25Q71SY5 747 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 TBC1D21Q8IYX1 336 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 EFCAB3Q8N7B9 438 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 TMEM102Q8N9M5 508 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 OR5AR1Q8NGP9 310 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 ELMO1Q92556 727 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 N4BP2L2Q92802 583 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 TCTN2Q96GX1 697 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 C17orf62Q9BQA9 187 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 DHRS4Q9BTZ2 278 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 CHRNA10Q9GZZ6 450 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 KLHL25Q9H0H3 589 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 PIH1D1Q9NWS0 290 aaKnown RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 POLG2Q9UHN1 485 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 PACSIN2Q9UNF0 486 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 ICKQ9UPZ9 632 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 ASF1AQ9Y294 204 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 PADI2Q9Y2J8 665 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 R3HDM2Q9Y2K5 976 aaKnown RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 ZNF451Q9Y4E5 1061 aa16.92■□□□□ 0.3
COL7A1-208ENST00000470076 UTP20O75691 2785 aaKnown RBP16.92■□□□□ 0.3
COL7A1-208ENST00000470076 VPS4BO75351 444 aa16.91■□□□□ 0.3
COL7A1-208ENST00000470076 GAS8O95995 478 aa16.91■□□□□ 0.3
COL7A1-208ENST00000470076 OR56A5P0C7T3 313 aa16.91■□□□□ 0.3
COL7A1-208ENST00000470076 ACADLP28330 430 aa16.91■□□□□ 0.3
COL7A1-208ENST00000470076 RRADP55042 308 aa16.91■□□□□ 0.3
COL7A1-208ENST00000470076 CDH17Q12864 832 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms