RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BOCQ9BWV1 1114 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 DPY30Q9C005 99 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 RNF38Q9H0F5 515 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 ING2Q9H160 280 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 KAT8Q9H7Z6 458 aaKnown RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 DCAF13Q9NV06 445 aaKnown RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 HECAQ9UBI9 543 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 MAN2B2Q9Y2E5 1009 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
BRCA1-209ENST00000470026 K7EPI3 171 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 MANBAO00462 879 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CXCR6O00574 342 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 AREL1O15033 823 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TSPAN3O60637 253 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LATS1O95835 1130 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CST1P01037 141 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 RHOAP61586 193 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TWF1Q12792 350 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 NFATC2Q13469 925 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LYPLAL1Q5VWZ2 237 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SUSD1Q6UWL2 747 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF554Q86TJ5 538 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LIX1Q8N485 282 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FBXO30Q8TB52 745 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FKBP10Q96AY3 582 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SLC29A3Q9BZD2 475 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LHPPQ9H008 270 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 PAIP1Q9H074 479 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ACTR8Q9H981 624 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SMURF2Q9HAU4 748 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TBC1D23Q9NUY8 699 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 RHBDL2Q9NX52 303 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 C16orf96A6NNT2 1141 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 GSTA4O15217 222 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SLC25A14O95258 325 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ALPIP09923 528 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ACRV1P26436 265 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 PIGAP37287 484 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TM4SF4P48230 202 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 IST1P53990 364 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CAP1Q01518 475 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 HMGCS1Q01581 520 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 BNIP3Q12983 259 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TOP3AQ13472 1001 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 PON2Q15165 354 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CTU2Q2VPK5 515 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ZC3H12BQ5HYM0 836 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TTC23LQ6PF05 361 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FAM151BQ6UXP7 276 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CHPFQ8IZ52 775 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 RGL4Q8IZJ4 473 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ZBTB2Q8N680 514 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 OR5K1Q8NHB7 308 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 SDCCAG3Q96C92 435 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CSF3RQ99062 836 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 CPPED1Q9BRF8 314 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 THUMPD3Q9BV44 507 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 VPS51Q9UID3 782 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 PSME2Q9UL46 239 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
BRCA1-209ENST00000470026 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
BRCA1-209ENST00000470026 ANAPC1Q9H1A4 1944 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 AGAP14A8MT82 685 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 NPIPB8E9PQR5 432 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 SLC16A6O15403 523 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 NBNO60934 754 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ULK1O75385 1050 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 DNAJB5O75953 348 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PRKD3O94806 890 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 GUCA1CO95843 209 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 IL7RP16871 459 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF12P17014 697 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF182P17025 639 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CTPS1P17812 591 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ITGALP20701 1170 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 DCTP40126 519 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ISL1P61371 349 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PHC1P78364 1004 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PLIN5Q00G26 463 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 KCNAB2Q13303 367 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CDKL4Q5MAI5 379 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms