RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SLC19A1P41440 591 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 ATP6V0D1P61421 351 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 DAB2P98082 770 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 SP140Q13342 867 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 CYHR1Q6ZMK1 362 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 LCA5Q86VQ0 697 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 DCUN1D3Q8IWE4 304 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 SFTPA2Q8IWL1 248 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 OR5K2Q8NHB8 316 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 CFAP61Q8NHU2 1237 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 ANKRD49Q8WVL7 239 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 ASB11Q8WXH4 323 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 NAT6Q93015 286 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 CNDP2Q96KP4 475 aaKnown RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 FERD3LQ96RJ6 166 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 VPS11Q9H270 941 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 VIPAS39Q9H9C1 493 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 SLC40A1Q9NP59 571 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 PADI4Q9UM07 663 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 GOLGA6L10A6NI86 522 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 RHPN2P1A8MT19 583 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 GFYI3L273 518 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 SLC16A5O15375 505 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 RGS16O15492 202 aaPredicted RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 ZBTB14O43829 449 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 PSIP1O75475 530 aaKnown RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 LTA4HP09960 611 aaKnown RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 CKMT1AP12532 417 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 MAP4P27816 1152 aaKnown RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 CSHL1Q14406 222 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 FAM83EQ2M2I3 478 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 PPM1JQ5JR12 505 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 DUS1LQ6P1R4 473 aaKnown RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 KLC3Q6P597 504 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 CYP4X1Q8N118 509 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 FAM122AQ96E09 287 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 TSNARE1Q96NA8 513 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 STMN4Q9H169 189 aaPredicted RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 KIR3DX1Q9H7L2 352 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 UCK1Q9HA47 277 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 NMRAL1Q9HBL8 299 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 RUVBL2Q9Y230 463 aaKnown RBP14.82□□□□□ -0.04
SNIP1-202ENST00000468040 FRYLO94915 3013 aa14.82□□□□□ -0.04
SNIP1-202ENST00000468040 CCDC189A1A4V9 331 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 EME2A4GXA9 379 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PABPN1LA6NDY0 278 aaKnown RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 BTN3A1O00481 513 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 ZW10O43264 779 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 CBFA2T3O75081 653 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 KLHL2O95198 593 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 C1orf105O95561 183 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 ENO2P09104 434 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 MYZAPP0CAP1 466 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PNLIPP16233 465 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 CKMT2P17540 419 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 CYP2A7P20853 494 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 GPR3P46089 330 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 KPNA2P52292 529 aaKnown RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 TSNAXIP1Q2TAA8 658 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 TMEM26Q6ZUK4 368 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 UBE2R2Q712K3 238 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 ZNF438Q7Z4V0 828 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PIP4P1Q86T03 277 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 ADAMTSL2Q86TH1 951 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 RASGRP3Q8IV61 690 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 SPNS2Q8IVW8 549 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 RAB42Q8N4Z0 105 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 FBXO15Q8NCQ5 510 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PHC3Q8NDX5 983 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 OR5AR1Q8NGP9 310 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 BAHD1Q8TBE0 780 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 RAD51AP1Q96B01 352 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PGM2Q96G03 612 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 SLC38A3Q99624 504 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 HGH1Q9BTY7 390 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 SLC12A9Q9BXP2 914 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 SLC32A1Q9H598 525 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 PCMTD2Q9NV79 361 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 SENP1Q9P0U3 644 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 LRIT1Q9P2V4 623 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 RNF215Q9Y6U7 377 aa14.81□□□□□ -0.04
SNIP1-202ENST00000468040 EP300Q09472 2414 aaPredicted RBP14.81□□□□□ -0.04
SNIP1-202ENST00000468040 LY6G6EA0A0G2JKS1 128 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 A0A1W2PPM1 405 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 ARHGEF33A8MVX0 844 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 PPM1DO15297 605 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 TNFSF14O43557 240 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 HIST1H2AGP0C0S8 130 aaPredicted RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 PYGBP11216 843 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 CD1DP15813 335 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 HIST1H2ADP20671 130 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 IRF9Q00978 393 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 GPR18Q14330 331 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 NR1D2Q14995 579 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 TRABD2AQ86V40 505 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms