RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 STRA6Q9BX79 667 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 PREBQ9HCU5 417 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 POLG2Q9UHN1 485 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 KLHL20Q9Y2M5 609 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 ARFGEF2Q9Y6D5 1785 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 PCNX3Q9H6A9 2034 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 KDM6AO15550 1401 aaPredicted RBP3.27□□□□□ -1.89
XRN1-206ENST00000467077 ADAMTS7Q9UKP4 1686 aa3.27□□□□□ -1.89
XRN1-206ENST00000467077 RTL1A6NKG5 1358 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 SLX4Q8IY92 1834 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 SCN11AQ9UI33 1791 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 A0A1W2PPH5 198 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 A0A1W2PRG0 241 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 HS3ST1O14792 307 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 ZNHIT1O43257 154 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 SH3BP5O60239 455 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 HSPA8P11142 646 aaKnown RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 POLR2CP19387 275 aaPredicted RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 UBA1P22314 1058 aaKnown RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 CBLP22681 906 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 UBA7P41226 1012 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 BMXP51813 675 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 F2RL1P55085 397 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 CLDN20P56880 219 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 RPL7AP62424 266 aaKnown RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 MAP2K1Q02750 393 aaPredicted RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 MAD2L1Q13257 205 aaPredicted RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 G3BP1Q13283 466 aaKnown RBP eCLIP3.26□□□□□ -1.89
XRN1-206ENST00000467077 CCNG2Q16589 344 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 DEFB115Q30KQ5 88 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 DPCR1Q3MIW9 517 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 CDONQ4KMG0 1287 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 TMEM35AQ53FP2 167 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 C18orf63Q68DL7 685 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 DOK6Q6PKX4 331 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 GPR180Q86V85 440 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 NAXEQ8NCW5 288 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 OR52I2Q8NH67 350 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 SMARCE1Q969G3 411 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 INTS12Q96CB8 462 aaKnown RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 MMABQ96EY8 250 aaPredicted RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 PPM1MQ96MI6 270 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 JMJD4Q9H9V9 463 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 SCPEP1Q9HB40 452 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 ABT1Q9ULW3 272 aaKnown RBP3.26□□□□□ -1.89
XRN1-206ENST00000467077 MAU2Q9Y6X3 613 aa3.26□□□□□ -1.89
XRN1-206ENST00000467077 INSRP06213 1382 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 ADAMTSL1Q8N6G6 1762 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 USP42Q9H9J4 1324 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 AKAP11Q9UKA4 1901 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CTAGE9A4FU28 777 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 FAM90A26D6RGX4 464 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 H0YIN7 160 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 M0QZ24 198 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CTAGE8P0CG41 777 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 FAM106CPP0CH98 169 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 TRIM49P0CI25 452 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 TRIM49CP0CI26 452 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 ATP1A3P13637 1013 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CEACAM1P13688 526 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 TM4SF1P30408 202 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 APOBEC1P41238 236 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 MLLT10P55197 1068 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CASP6P55212 293 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 SPOCK1Q08629 439 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 TMEM115Q12893 351 aaPredicted RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 FRG1Q14331 258 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 MYLK3Q32MK0 819 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 OR7E24Q6IFN5 339 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 FAM198BQ6UWH4 519 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 RAD9BQ6WBX8 426 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 ZNF704Q6ZNC4 412 aaPredicted RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 R3HCC1LQ7Z5L2 792 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 MAP7D3Q8IWC1 876 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CTAGE4Q8IX94 777 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 ZNF614Q8N883 585 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 SLC44A1Q8WWI5 657 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 ZNF622Q969S3 477 aaKnown RBP eCLIP3.25□□□□□ -1.893e-6■□□□□ 10.2
XRN1-206ENST00000467077 FAM149B1Q96BN6 582 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 MAP7D2Q96T17 732 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 SEC62Q99442 399 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 ZNF69Q9UC07 566 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 CNOT8Q9UFF9 292 aaKnown RBP3.25□□□□□ -1.89
XRN1-206ENST00000467077 FBXL2Q9UKC9 423 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 THSD7BQ9C0I4 1608 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 FLT4P35916 1363 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 KDRP35968 1356 aa3.25□□□□□ -1.89
XRN1-206ENST00000467077 LTBP1Q14766 1721 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 PASKQ96RG2 1323 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 A0A1W2PQF6 199 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 C1orf226A1L170 272 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 J3KRW8 73 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 ANKRD28O15084 1053 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 KCNN4O15554 427 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 EPB41L2O43491 1005 aaKnown RBP3.24□□□□□ -1.89
XRN1-206ENST00000467077 IGKV3-15P01624 115 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 RGS2P41220 211 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 PTGER3P43115 390 aa3.24□□□□□ -1.89
XRN1-206ENST00000467077 CRKLP46109 303 aaKnown RBP3.24□□□□□ -1.89
XRN1-206ENST00000467077 RPL24P83731 157 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms