RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 DENND5AQ6IQ26 1287 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 SARM1Q6SZW1 724 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 HEXDCQ8WVB3 486 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 SNRNP40Q96DI7 357 aaKnown RBP18.22■□□□□ 0.51
SRSF4-202ENST00000466448 ACTR10Q9NZ32 417 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 C5AR2Q9P296 337 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 ERRFI1Q9UJM3 462 aaPredicted RBP18.22■□□□□ 0.51
SRSF4-202ENST00000466448 SHANK1Q9Y566 2161 aa18.22■□□□□ 0.51
SRSF4-202ENST00000466448 HBQ1P09105 142 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 CBSLP0DN79 551 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 MC4RP32245 332 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 CBSP35520 551 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 HADHAP40939 763 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 NR6A1Q15406 480 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 GPR33Q49SQ1 333 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ANKRD20A2Q5SQ80 823 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ANKRD20A1Q5TYW2 823 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ANKRD20A3Q5VUR7 823 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 SPESP1Q6UW49 350 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 GPR135Q8IZ08 494 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 IQCKQ8N0W5 287 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 CLDN19Q8N6F1 224 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 TCTN2Q96GX1 697 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 C19orf43Q9BQ61 176 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 FAM60AQ9NP50 221 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ASF1BQ9NVP2 202 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ZDHHC3Q9NYG2 299 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 ICKQ9UPZ9 632 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 B3GNT3Q9Y2A9 372 aa18.21■□□□□ 0.51
SRSF4-202ENST00000466448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.21■□□□□ 0.51
SRSF4-202ENST00000466448 DOPEY1Q5JWR5 2465 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 WIPF3A6NGB9 483 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 H3BMH7 237 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 HCRTR1O43613 425 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 LDB2O43679 373 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 CBX6O95503 412 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 CLDN1O95832 211 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 PRSS56P0CW18 603 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 ACRV1P26436 265 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 COL8A1P27658 744 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 OTUD4Q01804 1114 aaKnown RBP18.2■□□□□ 0.5
SRSF4-202ENST00000466448 RPA4Q13156 261 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 PRPSAP1Q14558 356 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 ZIC1Q15915 447 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 C1orf189Q5VU69 101 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 MLIPQ5VWP3 458 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 ZNF787Q6DD87 383 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 C11orf63Q6NUN7 778 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 MAMDC2Q7Z304 686 aaPredicted RBP18.2■□□□□ 0.5
SRSF4-202ENST00000466448 TRIM73Q86UV7 250 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 C19orf47Q8N9M1 422 aaKnown RBP18.2■□□□□ 0.5
SRSF4-202ENST00000466448 ACTL9Q8TC94 416 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 TFGQ92734 400 aaPredicted RBP18.2■□□□□ 0.5
SRSF4-202ENST00000466448 DNAJC1Q96KC8 554 aaKnown RBP18.2■□□□□ 0.5
SRSF4-202ENST00000466448 VPS37BQ9H9H4 285 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 TFR2Q9UP52 801 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 MED13Q9UHV7 2174 aa18.2■□□□□ 0.5
SRSF4-202ENST00000466448 TRBV5-4A0A0C4DH59 114 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 KCNN4O15554 427 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 OR2B3O76000 313 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 LDLRP01130 860 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 ATXN8OSP0DMR3 200 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 UGT2B7P16662 529 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 MAGEA1P43355 309 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 GABRA4P48169 554 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 SPARCL1Q14515 664 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 SSPNQ14714 243 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 DEFB110Q30KQ9 67 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 ZRANB3Q5FWF4 1079 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 DCAF10Q5QP82 559 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 SERPINA9Q86WD7 417 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CNGA4Q8IV77 575 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CDKL3Q8IVW4 592 aaPredicted RBP18.19■□□□□ 0.5
SRSF4-202ENST00000466448 GALNT16Q8N428 558 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CISD2Q8N5K1 135 aaKnown RBP18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CCDC110Q8TBZ0 833 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 N4BP2L2Q92802 583 aaPredicted RBP18.19■□□□□ 0.5
SRSF4-202ENST00000466448 FER1L6-AS2Q96M78 137 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 IP6K3Q96PC2 410 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 GBP5Q96PP8 586 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 FAM118BQ9BPY3 351 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 TBL1YQ9BQ87 522 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 C17orf62Q9BQA9 187 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 FERMT1Q9BQL6 677 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 SPRTNQ9H040 489 aaPredicted RBP18.19■□□□□ 0.5
SRSF4-202ENST00000466448 ARNT2Q9HBZ2 717 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 PTRH2Q9Y3E5 179 aaKnown RBP18.19■□□□□ 0.5
SRSF4-202ENST00000466448 AP1M2Q9Y6Q5 423 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 CENPEQ02224 2701 aa18.19■□□□□ 0.5
SRSF4-202ENST00000466448 ALPPP05187 535 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 CTSBP07858 339 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 FOLR3P41439 243 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 FOXL2P58012 376 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 EIF3EP60228 445 aaKnown RBP18.18■□□□□ 0.5
SRSF4-202ENST00000466448 MYBPC3Q14896 1274 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 RHBDD2Q6NTF9 364 aa18.18■□□□□ 0.5
SRSF4-202ENST00000466448 ZNF449Q6P9G9 518 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms