RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TRIM61Q5EBN2 209 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 UGT3A1Q6NUS8 523 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 FAM83HQ6ZRV2 1179 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 ZCCHC23Q6ZST2 131 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 CENPLQ8N0S6 344 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 TMEM151AQ8N4L1 468 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 ZBTB2Q8N680 514 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 CCL4L1Q8NHW4 92 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 LRMDAQ9H2I8 198 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 POPDC3Q9HBV1 291 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 OXSMQ9NWU1 459 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC6A14Q9UN76 642 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 CDYLQ9Y232 598 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 EP300Q09472 2414 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 SLC5A10A0PJK1 596 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KLHL33A6NCF5 533 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 TARM1B6A8C7 271 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KPNA5O15131 536 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KCNJ13O60928 360 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 NQO1P15559 274 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 ALOX15P16050 662 aaPredicted RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GMPRP36959 345 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 DMPKQ09013 629 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 HSPA14Q0VDF9 509 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GRIK2Q13002 908 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 LRP8Q14114 963 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GBX1Q14549 363 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 TCEA2Q15560 299 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 PLA2G2CQ5R387 149 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 PLEKHS1Q5SXH7 462 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 METRNLQ641Q3 311 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 NRROSQ86YC3 692 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 HM13Q8TCT9 377 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 ASZ1Q8WWH4 475 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GPR78Q96P69 363 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 TMEM237Q96Q45 408 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 GPAMQ9HCL2 828 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 FAM86C1Q9NVL1 165 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 APOBEC3BQ9UH17 382 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 LNPEPQ9UIQ6 1025 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 RUVBL2Q9Y230 463 aaKnown RBP16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 KCNK6Q9Y257 313 aa16.56■□□□□ 0.24
EXOSC3-203ENST00000465229 LIN7AO14910 233 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ITM2AO43736 263 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 SLCO2B1O94956 709 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 RETP07949 1114 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 T-ENOLP0DO92 83 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 VCLP18206 1134 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 AK4P27144 223 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 SERPINB3P29508 390 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 PDHA2P29803 388 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 NBL1P41271 181 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ASPHQ12797 758 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 C1orf61Q13536 156 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ACSBG2Q5FVE4 666 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 PRRT3Q5FWE3 981 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 VRK3Q8IV63 474 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 GPBAR1Q8TDU6 330 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ANKRD49Q8WVL7 239 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 SORT1Q99523 831 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ELF4Q99607 663 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 LRRC61Q9BV99 259 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 ZNF395Q9H8N7 513 aaPredicted RBP16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 COG4Q9H9E3 785 aa16.55■□□□□ 0.24
EXOSC3-203ENST00000465229 CCDC22O60826 627 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 SNUPNO95149 360 aaKnown RBP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 CELA2BP08218 269 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 CTSEP14091 401 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 ZNF37AP17032 561 aaPredicted RBP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 PREPP48147 710 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 RXRGP48443 463 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 CLCNKAP51800 687 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 HK2P52789 917 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 AQP5P55064 265 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 HNRNPKP61978 463 aaKnown RBP eCLIP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 ILF3Q12906 894 aaKnown RBP eCLIP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 TBCCQ15814 346 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 HLA-BQ31612 363 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 TTLL9Q3SXZ7 439 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 LIPMQ5VYY2 423 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 LRRC8EQ6NSJ5 796 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 CPNE9Q8IYJ1 553 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 EEF1AKMT1Q8WVE0 214 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 KCTD4Q8WVF5 259 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 TMEM159Q96B96 161 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 UBXN10Q96LJ8 280 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 MRPL57Q9BQC6 102 aaKnown RBP16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 SYTL2Q9HCH5 934 aa16.54■□□□□ 0.24
EXOSC3-203ENST00000465229 ARHGAP33O14559 1287 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 HGSO14964 777 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 TSPAN12O95859 305 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 SBK3P0C264 359 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 DGKAP23743 735 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 IL2P60568 153 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 PLOD1Q02809 727 aaPredicted RBP16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 RPA4Q13156 261 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 SHBQ15464 509 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 ZNF423Q2M1K9 1284 aa16.53■□□□□ 0.24
EXOSC3-203ENST00000465229 FAM83EQ2M2I3 478 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms