RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TMEM159Q96B96 161 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 PKNOX2Q96KN3 472 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 DPEP2Q9H4A9 486 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 RHOJQ9H4E5 214 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 FBXO6Q9NRD1 293 aaPredicted RBP17.07■□□□□ 0.32
CPSF4-209ENST00000465132 SPATS2LQ9NUQ6 558 aaKnown RBP17.07■□□□□ 0.32
CPSF4-209ENST00000465132 TAS2R13Q9NYV9 303 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 LRIT1Q9P2V4 623 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CRYL1Q9Y2S2 319 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 OR5K4A6NMS3 321 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 NUDT21O43809 227 aaKnown RBP17.06■□□□□ 0.32
CPSF4-209ENST00000465132 OR1I1O60431 355 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 KRT38O76015 456 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 HAUS5O94927 633 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 AHSGP02765 367 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 PRSS56P0CW18 603 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 LIPCP11150 499 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 ACP5P13686 325 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 ITIH1P19827 911 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 FMO4P31512 558 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 HALP42357 657 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 B4GALNT1Q00973 533 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 DMPKQ09013 629 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 SLC29A2Q14542 456 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 KHDC1Q4VXA5 237 aaKnown RBP17.06■□□□□ 0.32
CPSF4-209ENST00000465132 ZNF648Q5T619 568 aaPredicted RBP17.06■□□□□ 0.32
CPSF4-209ENST00000465132 OTOAQ7RTW8 1153 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
CPSF4-209ENST00000465132 CLDN19Q8N6F1 224 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 EXD3Q8N9H8 876 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 STN1Q9H668 368 aaKnown RBP17.06■□□□□ 0.32
CPSF4-209ENST00000465132 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 SLC24A2Q9UI40 661 aa17.06■□□□□ 0.32
CPSF4-209ENST00000465132 ZW10O43264 779 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 ACTR1BP42025 376 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 ACTR1AP61163 376 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 CTBSQ01459 385 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 POU4F1Q01851 419 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 IFFO1Q0D2I5 559 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
CPSF4-209ENST00000465132 LINC00303Q3SY05 128 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 PLEKHS1Q5SXH7 462 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 USP53Q70EK8 1073 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 TMPRSS9Q7Z410 1059 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 SLITRK4Q8IW52 837 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 ELMO1Q92556 727 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 BIRC8Q96P09 236 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 RBBP8Q99708 897 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 CMKLR1Q99788 373 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 OSGEPL1Q9H4B0 414 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 ZNF180Q9UJW8 692 aa17.05■□□□□ 0.32
CPSF4-209ENST00000465132 ZFC3H1O60293 1989 aaKnown RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 TENM4Q6N022 2769 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 PRAMEF33A0A0G2JMD5 474 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 AGRPO00253 132 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 EIF3FO00303 357 aaPredicted RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 IFRD1O00458 451 aaPredicted RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 SLC28A2O43868 658 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 KDM1AO60341 852 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 PRAMEF10O60809 474 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 ETV5P41161 510 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 RGS4P49798 205 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 CTSCP53634 463 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 MPP1Q00013 466 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 WASH2PQ6VEQ5 465 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 ZC3HC1Q86WB0 502 aaKnown RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 ZNF547Q8IVP9 402 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 GPATCH11Q8N954 259 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 MTBPQ96DY7 904 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 AARSD1Q9BTE6 412 aaKnown RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 POPDC3Q9HBV1 291 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 SYTL2Q9HCH5 934 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 WASH6PQ9NQA3 447 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 LATS2Q9NRM7 1088 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 FOXJ2Q9P0K8 574 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 TRMT6Q9UJA5 497 aaKnown RBP17.04■□□□□ 0.32
CPSF4-209ENST00000465132 VWA7Q9Y334 891 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 HEBP2Q9Y5Z4 205 aa17.04■□□□□ 0.32
CPSF4-209ENST00000465132 AHCTF1Q8WYP5 2266 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 IQANK1A0A1B0GTG1 560 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 PYCARD-AS1I3L0S3 204 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 RPN2P04844 631 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 ITGB2P05107 769 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 NUDT17P0C025 328 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 SLC35G4P0C7Q5 338 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 CBSLP0DN79 551 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 ENO3P13929 434 aaPredicted RBP17.03■□□□□ 0.32
CPSF4-209ENST00000465132 ATP5DP30049 168 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 CA5AP35218 305 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 CBSP35520 551 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 HSD17B3P37058 310 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 LIMK2P53671 638 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
CPSF4-209ENST00000465132 BIRC2Q13490 618 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 UAP1Q16222 522 aaPredicted RBP17.03■□□□□ 0.32
CPSF4-209ENST00000465132 PHF19Q5T6S3 580 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
CPSF4-209ENST00000465132 METRNLQ641Q3 311 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms