RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CEP104O60308 925 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 PRDX3P30048 256 aaKnown RBP25.09■■□□□ 1.61
U2AF1-206ENST00000464750 SESN2P58004 480 aaPredicted RBP25.09■■□□□ 1.61
U2AF1-206ENST00000464750 SEMA3AQ14563 771 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 FASTKD1Q53R41 847 aaKnown RBP25.09■■□□□ 1.61
U2AF1-206ENST00000464750 GSTA5Q7RTV2 222 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 PITPNM3Q9BZ71 974 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 FANCEQ9HB96 536 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 LATS2Q9NRM7 1088 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 KCND1Q9NSA2 647 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 ICKQ9UPZ9 632 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 PCDHGA6Q9Y5G7 932 aa25.09■■□□□ 1.61
U2AF1-206ENST00000464750 C2orf74A8MZ97 194 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 C21orf140B9A014 251 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 F8W8V4 182 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 PYCARD-AS1I3L0S3 204 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ZIC2O95409 532 aaPredicted RBP25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ST6GAL1P15907 406 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ACADLP28330 430 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ERV3-1Q14264 604 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 C4orf22Q6V702 233 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ADGRF3Q8IZF5 1079 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 APOBEC4Q8WW27 367 aaKnown RBP25.08■■□□□ 1.61
U2AF1-206ENST00000464750 ACTR10Q9NZ32 417 aa25.08■■□□□ 1.61
U2AF1-206ENST00000464750 SNRNP200O75643 2136 aaKnown RBP25.07■■□□□ 1.6
U2AF1-206ENST00000464750 BHMG1C9JSJ3 638 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-206ENST00000464750 NRDCO43847 1150 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 CXCR5P32302 372 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 KCNJ1P48048 391 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 PLOD1Q02809 727 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-206ENST00000464750 AARS2Q5JTZ9 985 aaKnown RBP25.07■■□□□ 1.6
U2AF1-206ENST00000464750 PCID2Q5JVF3 399 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 TBC1D21Q8IYX1 336 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 SGSM3Q96HU1 749 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 RUFY1Q96T51 708 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 AKIRIN1Q9H9L7 192 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-206ENST00000464750 CHRAC1Q9NRG0 131 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 CATSPERZQ9NTU4 200 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 PPP2R2CQ9Y2T4 447 aa25.07■■□□□ 1.6
U2AF1-206ENST00000464750 CDC14CA4D256 554 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 CREG1O75629 220 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 FURINP09958 794 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 PVRP15151 417 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 SHMT2P34897 504 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 PPARGP37231 505 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-206ENST00000464750 CSE1LP55060 971 aaKnown RBP25.06■■□□□ 1.6
U2AF1-206ENST00000464750 CRADDP78560 199 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 ABRQ12979 859 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 GPS2Q13227 327 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 FAM199XQ6PEV8 388 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-206ENST00000464750 LDB1Q86U70 411 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-206ENST00000464750 LKAAEAR1Q8TD35 194 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 TRAPPC9Q96Q05 1148 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 TWSG1Q9GZX9 223 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 KLHL25Q9H0H3 589 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 ACTL8Q9H568 366 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 ANAPC5Q9UJX4 755 aa25.06■■□□□ 1.6
U2AF1-206ENST00000464750 TDRKHQ9Y2W6 561 aaKnown RBP25.06■■□□□ 1.6
U2AF1-206ENST00000464750 TENM4Q6N022 2769 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 PIPSLA2A3N6 862 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 TMEM150CB9EJG8 249 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 CCR7P32248 378 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 PRAMEF17Q5VTA0 474 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 SPESP1Q6UW49 350 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 OR5K2Q8NHB8 316 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 C9orf43Q8TAL5 461 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-206ENST00000464750 MR1Q95460 341 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 TSSK1BQ9BXA7 367 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 IL22Q9GZX6 179 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 SYTL2Q9HCH5 934 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 MARCH4Q9P2E8 410 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-206ENST00000464750 POLG2Q9UHN1 485 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 POLHQ9Y253 713 aa25.05■■□□□ 1.6
U2AF1-206ENST00000464750 MAP3K7O43318 606 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 SUV39H1O43463 412 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 KCTD19Q17RG1 926 aaPredicted RBP25.04■■□□□ 1.6
U2AF1-206ENST00000464750 UNC5AQ6ZN44 842 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 ATG14Q6ZNE5 492 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 TMEM135Q86UB9 458 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 TRIM73Q86UV7 250 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 HOOK3Q86VS8 718 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 PTRH1Q86Y79 214 aaKnown RBP25.04■■□□□ 1.6
U2AF1-206ENST00000464750 SLC38A9Q8NBW4 561 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 OR1L3Q8NH93 324 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 CPT1BQ92523 772 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 TRIM4Q9C037 500 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 HOMER3Q9NSC5 361 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 TREX1Q9NSU2 369 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 BFARQ9NZS9 450 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 PLAGL1Q9UM63 463 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 KCNMB2Q9Y691 235 aa25.04■■□□□ 1.6
U2AF1-206ENST00000464750 IQCF5A8MTL0 148 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 AP3B1O00203 1094 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 MSL3P1P0C860 447 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 UGT2B7P16662 529 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 TTPAP49638 278 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 RPS18P62269 152 aaKnown RBP25.03■■□□□ 1.6
U2AF1-206ENST00000464750 HSPA14Q0VDF9 509 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 ZNF789Q5FWF6 425 aa25.03■■□□□ 1.6
U2AF1-206ENST00000464750 SLC22A15Q8IZD6 547 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms