RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RAB33BQ9H082 229 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 TSPYL1Q9H0U9 437 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SRMSQ9H3Y6 488 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 POLR1BQ9H9Y6 1135 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 LRRC4CQ9HCJ2 640 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 HRASLS2Q9NWW9 162 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 NSMCE4AQ9NXX6 385 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 AKAP7Q9P0M2 348 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 EPHA6Q9UF33 1036 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 KLHL3Q9UH77 587 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 DHRS7Q9Y394 339 aa14.12□□□□□ -0.15
SQSTM1-205ENST00000464493 A0A1W2PNU3 283 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 TCRBV9S1A1TA0A576 114 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 OR6C74A6NCV1 312 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 OR5K3A6NET4 321 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 A8MU76 341 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 AGRPO00253 132 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 HGSO14964 777 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 C9P02748 559 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 RHOXF2BP0C7M4 288 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 ATP5DP30049 168 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 SKIV2L2P42285 1042 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 ABCG1P45844 678 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 GFERP55789 205 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 GABREP78334 506 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 CYP4F3Q08477 520 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 CUL1Q13616 776 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 GBX1Q14549 363 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 RBM20Q5T481 1227 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 UGT3A1Q6NUS8 523 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 ARMC6Q6NXE6 501 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 IRGCQ6NXR0 463 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 FOXR1Q6PIV2 292 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 STRA8Q7Z7C7 330 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 OOSP2Q86WS3 158 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 IFT20Q8IY31 132 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 FBXO39Q8N4B4 442 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 FOPNLQ96NB1 174 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 TGM7Q96PF1 710 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 GPR21Q99679 349 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 SLC30A3Q99726 388 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 RHOXF2Q9BQY4 288 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 SMYD2Q9NRG4 433 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 TAS2R13Q9NYV9 303 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 CORO1CQ9ULV4 474 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 TDRKHQ9Y2W6 561 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 LOXL2Q9Y4K0 774 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 PSAT1Q9Y617 370 aa14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 MN1Q10571 1320 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-205ENST00000464493 PLD2O14939 933 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 KDM1AO60341 852 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 SPAG6O75602 509 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 ECHS1P30084 290 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 CSTF2P33240 577 aaKnown RBP eCLIP14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 TIAL1Q01085 375 aaKnown RBP eCLIP14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 C16orf72Q14CZ0 275 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 KLHL38Q2WGJ6 581 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 TTC23LQ6PF05 361 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 ARHGAP22Q7Z5H3 698 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 AMIGO1Q86WK6 493 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 RELL1Q8IUW5 271 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 LSMEM2Q8N112 164 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 GPATCH11Q8N954 259 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 MDM1Q8TC05 714 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 CD200R1Q8TD46 325 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 FMO2Q99518 471 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 XKR8Q9H6D3 395 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 CCDC86Q9H6F5 360 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 TRMT6Q9UJA5 497 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 TSR3Q9UJK0 312 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 VWA7Q9Y334 891 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 PCDHGA8Q9Y5G5 932 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 NFS1Q9Y697 457 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 FREM2Q5SZK8 3169 aa14.1□□□□□ -0.15
SQSTM1-205ENST00000464493 ACACBO00763 2458 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 FAM159BA6NKW6 160 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CXorf49A8MYA2 514 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 TOX3O15405 576 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 BRINP1O60477 761 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 RASSF9O75901 435 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 PIAS1O75925 651 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 MATN4O95460 622 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 C1orf105O95561 183 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 JMJD7P0C870 316 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 TPBGLP0DKB5 382 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CBSLP0DN79 551 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 HGFP14210 728 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 POLR2CP19387 275 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CD9P21926 228 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 RBMS1P29558 406 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 SHMT2P34897 504 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CBSP35520 551 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CCNFP41002 786 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 CDKN2DP55273 166 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 PPP1CAP62136 330 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms