RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 LPGAT1Q92604 370 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 C9orf72Q96LT7 481 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 NRTNQ99748 197 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 HRASLS2Q9NWW9 162 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 MOCS1Q9NZB8 636 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 GNPTGQ9UJJ9 305 aa16.59■□□□□ 0.25
VPS52-215ENST00000464425 MN1Q10571 1320 aaPredicted RBP16.59■□□□□ 0.25
VPS52-215ENST00000464425 ANKRD11Q6UB99 2663 aaPredicted RBP16.59■□□□□ 0.25
VPS52-215ENST00000464425 OR6C74A6NCV1 312 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 KIF1CO43896 1103 aaKnown RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 RASSF9O75901 435 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 C9P02748 559 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 OGNP20774 298 aaKnown RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 RPS3P23396 243 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS52-215ENST00000464425 AOAHP28039 575 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ACADLP28330 430 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 NDUFS1P28331 727 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 EIF2S3P41091 472 aaKnown RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 MLLT3P42568 568 aaPredicted RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 SEPHS1P49903 392 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 PCBP4P57723 403 aaKnown RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 CTBP1Q13363 440 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 SLMAPQ14BN4 828 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ZNF789Q5FWF6 425 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 CTSL3PQ5NE16 218 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 RNF187Q5TA31 235 aaPredicted RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 KLHL35Q6PF15 583 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 DENND6AQ8IWF6 608 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ACVR1CQ8NER5 493 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 GSDMBQ8TAX9 411 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 HNRNPLLQ8WVV9 542 aaKnown RBP16.58■□□□□ 0.24
VPS52-215ENST00000464425 ASZ1Q8WWH4 475 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 LCN9Q8WX39 176 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 FAM136AQ96C01 138 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 CERS2Q96G23 380 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 CFAP36Q96G28 342 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ZDHHC12Q96GR4 267 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 BIRC8Q96P09 236 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 HGH1Q9BTY7 390 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 MVB12BQ9H7P6 319 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ASF1AQ9Y294 204 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 CACNA1BQ00975 2339 aa16.58■□□□□ 0.24
VPS52-215ENST00000464425 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 RRP8O43159 456 aaKnown RBP16.57■□□□□ 0.24
VPS52-215ENST00000464425 PRAMEF10O60809 474 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 SPAG6O75602 509 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 S1PR4O95977 384 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 APOA4P06727 396 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 PLOD1Q02809 727 aaPredicted RBP16.57■□□□□ 0.24
VPS52-215ENST00000464425 ABRQ12979 859 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 HSP90AA5PQ58FG0 334 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 CACHD1Q5VU97 1274 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 ARMC6Q6NXE6 501 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 WDR93Q6P2C0 686 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 C19orf48Q6RUI8 117 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 C3orf62Q6ZUJ4 267 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 CLEC14AQ86T13 490 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 KCNMB4Q86W47 210 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 CNTN4Q8IWV2 1026 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 OR5AR1Q8NGP9 310 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 CFAP61Q8NHU2 1237 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 PMEPA1Q969W9 287 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 PANX3Q96QZ0 392 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 FAM167BQ9BTA0 163 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 SRMSQ9H3Y6 488 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 XKR8Q9H6D3 395 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 LRRC4CQ9HCJ2 640 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 FBXO6Q9NRD1 293 aaPredicted RBP16.57■□□□□ 0.24
VPS52-215ENST00000464425 IARS2Q9NSE4 1012 aaKnown RBP16.57■□□□□ 0.24
VPS52-215ENST00000464425 SLC39A1Q9NY26 324 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 EPHA6Q9UF33 1036 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 VPS9D1Q9Y2B5 631 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 PCDHGA7Q9Y5G6 932 aa16.57■□□□□ 0.24
VPS52-215ENST00000464425 OR5K3A6NET4 321 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 C9orf172C9J069 976 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 NIPSNAP2O75323 286 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 GPC4O75487 556 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TUBBP07437 444 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 ERVK-10P10266 1014 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 POLR2CP19387 275 aaPredicted RBP16.56■□□□□ 0.24
VPS52-215ENST00000464425 CHRM3P20309 590 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 MCM3P25205 808 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 ITPKBP27987 946 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 SSTR1P30872 391 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 SLC1A2P43004 574 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 ADARP55265 1226 aaKnown RBP16.56■□□□□ 0.24
VPS52-215ENST00000464425 GPX6P59796 221 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TMED2Q15363 201 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 ERCC6LQ2NKX8 1250 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TMEM164Q5U3C3 297 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 LRRC69Q6ZNQ3 347 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 OTOAQ7RTW8 1153 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 OOSP2Q86WS3 158 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 SLC22A15Q8IZD6 547 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 ZNF248Q8NDW4 579 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TAAR9Q96RI9 348 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 RAB33BQ9H082 229 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TRIT1Q9H3H1 467 aaKnown RBP16.56■□□□□ 0.24
VPS52-215ENST00000464425 INTS10Q9NVR2 710 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms