RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CBX4O00257 560 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 STX7O15400 261 aaKnown RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 SUPT3HO75486 399 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ESRRBO95718 433 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 TSPAN12O95859 305 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 DNTTP04053 509 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ZNF806P0C7X5 589 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 SRCP12931 536 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 IDO1P14902 403 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 RPS3P23396 243 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 MC4RP32245 332 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 IL2P60568 153 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 RPL6Q02878 288 aaKnown RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 CACNG1Q06432 222 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ELAVL3Q14576 367 aaKnown RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 CSRP2Q16527 193 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 GRAMD1BQ3KR37 738 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 XKR7Q5GH72 579 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 USP30Q70CQ3 517 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 TMEFF1Q8IYR6 380 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 MIER2Q8N344 545 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 TMEM102Q8N9M5 508 aaPredicted RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 LPCAT1Q8NF37 534 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 CADM4Q8NFZ8 388 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 GRIN3AQ8TCU5 1115 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ZUFSPQ96AP4 578 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 DCUN1D1Q96GG9 259 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 TOE1Q96GM8 510 aaKnown RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 GPR21Q99679 349 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 P2RY12Q9H244 342 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ARRDC1-AS1Q9H2J1 176 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 CD93Q9NPY3 652 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 SEMA4GQ9NTN9 838 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ADA2Q9NZK5 511 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 IL17CQ9P0M4 197 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 TRMT6Q9UJA5 497 aaKnown RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 ACTL7AQ9Y615 435 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 PLXNB3Q9ULL4 1909 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 MUC22E2RYF6 1773 aaPredicted RBP9.72□□□□□ -0.85
PTPRD-207ENST00000463477 PIP5K1BO14986 540 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 SIX3O95343 332 aaPredicted RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 UROSP10746 265 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 HSD17B1P14061 328 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PAX7P23759 505 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 EEF1DP29692 281 aaKnown RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 SLC7A1P30825 629 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 HMGCLP35914 325 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 MAPK8P45983 427 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 DHPSP49366 369 aaPredicted RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CDH13P55290 713 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CREB5Q02930 508 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 SPEM2Q0P670 501 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 TSNQ15631 228 aaKnown RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CST6Q15828 149 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CTSL3PQ5NE16 218 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PSAPL1Q6NUJ1 521 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PAOXQ6QHF9 649 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 MMAAQ8IVH4 418 aaKnown RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PLPP6Q8IY26 295 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PIANPQ8IYJ0 282 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 ST13P4Q8IZP2 240 aaPredicted RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 RYBPQ8N488 228 aaPredicted RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 OR56A4Q8NGH8 313 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CD200R1Q8TD46 325 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 FOXJ1Q92949 421 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 ISG20Q96AZ6 181 aaKnown RBP9.71□□□□□ -0.85
PTPRD-207ENST00000463477 KLHL32Q96NJ5 620 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 TUBGCP5Q96RT8 1024 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 ZNF382Q96SR6 550 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 CEP44Q9C0F1 390 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PCED1AQ9H1Q7 454 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 MUC13Q9H3R2 512 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 TUBB1Q9H4B7 451 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PARD6AQ9NPB6 346 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 NUDT4Q9NZJ9 180 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 POLG2Q9UHN1 485 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PCTPQ9UKL6 214 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 NCKAP1Q9Y2A7 1128 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 DHRS7Q9Y394 339 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PCDHGC4Q9Y5F7 938 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 PLXND1Q9Y4D7 1925 aa9.71□□□□□ -0.85
PTPRD-207ENST00000463477 A0A0J9YYE9 177 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 DYTNA2CJ06 578 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PRORSD1PA6NEY8 169 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 AQP12BA6NM10 295 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 K7ERQ8 282 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 SMAD6O43541 496 aaKnown RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 DNAJA2O60884 412 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 NDUFS2O75306 463 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF821O75541 412 aaPredicted RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 CHEK2O96017 543 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 ADH1BP00325 375 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 UBTFL6P0CB48 400 aaPredicted RBP9.71□□□□□ -0.86
PTPRD-207ENST00000463477 PRSS56P0CW18 603 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 C5AR1P21730 350 aa9.71□□□□□ -0.86
PTPRD-207ENST00000463477 HOXD12P35452 270 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms