RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 IP6K3Q96PC2 410 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 TRAPPC9Q96Q05 1148 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 COPS8Q99627 209 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 GORASP1Q9BQQ3 440 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 OR52A5Q9H2C5 316 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 KCNF1Q9H3M0 494 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 MVB12BQ9H7P6 319 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 COG4Q9H9E3 785 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 LUZP4Q9P127 313 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 MAP10Q9P2G4 905 aa19.18■□□□□ 0.66
VARS-221ENST00000463184 AAR2Q9Y312 384 aaKnown RBP19.18■□□□□ 0.66
VARS-221ENST00000463184 C2orf74A8MZ97 194 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 H7C0C1 242 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 BTN3A1O00481 513 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 ZNF749O43361 778 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 RNF224P0DH78 156 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 ITGALP20701 1170 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 RBL1P28749 1068 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 HADHAP40939 763 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 ATP5OP48047 213 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 LMAN1P49257 510 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 MRPL49Q13405 166 aaKnown RBP19.17■□□□□ 0.66
VARS-221ENST00000463184 ATP1A4Q13733 1029 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 PTCHD3Q3KNS1 767 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 ZNF449Q6P9G9 518 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 SNX20Q7Z614 316 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 OR52E1Q8NGJ3 308 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 OR13C4Q8NGS5 318 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 PRR7Q8TB68 274 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 C17orf62Q9BQA9 187 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 GOLPH3Q9H4A6 298 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 VPS37BQ9H9H4 285 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 PPP2R2CQ9Y2T4 447 aa19.17■□□□□ 0.66
VARS-221ENST00000463184 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.17■□□□□ 0.66
VARS-221ENST00000463184 GRID2IPA4D2P6 1211 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 APOC4-APOC2K7ER74 178 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 APOC2P02655 101 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 RPA4Q13156 261 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 MSLNQ13421 630 aaPredicted RBP19.16■□□□□ 0.66
VARS-221ENST00000463184 PRPSAP1Q14558 356 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 SSPNQ14714 243 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 GPR33Q49SQ1 333 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 VWA5B1Q5TIE3 1220 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 ZNF385CQ66K41 422 aaPredicted RBP19.16■□□□□ 0.66
VARS-221ENST00000463184 BBS12Q6ZW61 710 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 AMIGO1Q86WK6 493 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 GPR135Q8IZ08 494 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 SYCE1Q8N0S2 351 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 LRRC57Q8N9N7 239 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 APOL2Q9BQE5 337 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 GUCA1BQ9UMX6 200 aa19.16■□□□□ 0.66
VARS-221ENST00000463184 PRRC2CQ9Y520 2896 aaKnown RBP19.15■□□□□ 0.66
VARS-221ENST00000463184 UNC79Q9P2D8 2635 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 KLHL41O60662 606 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 KLF7O75840 302 aaPredicted RBP19.15■□□□□ 0.66
VARS-221ENST00000463184 CD63P08962 238 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 ZNF140P52738 457 aaPredicted RBP19.15■□□□□ 0.66
VARS-221ENST00000463184 TMPRSS15P98073 1019 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 ZNF658BQ4V348 819 aaPredicted RBP19.15■□□□□ 0.66
VARS-221ENST00000463184 CDHR3Q6ZTQ4 885 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 ADGRF3Q8IZF5 1079 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 PHC3Q8NDX5 983 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 N4BP2L2Q92802 583 aaPredicted RBP19.15■□□□□ 0.66
VARS-221ENST00000463184 FER1L6-AS2Q96M78 137 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 HEMGNQ9BXL5 484 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 FAM96AQ9H5X1 160 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 C10orf88Q9H8K7 445 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 ZDHHC3Q9NYG2 299 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 ACTR10Q9NZ32 417 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 AP1M2Q9Y6Q5 423 aa19.15■□□□□ 0.66
VARS-221ENST00000463184 IGLV3-16A0A075B6K0 115 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 A1L4Q6 167 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 IGHEP01854 428 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 PVRP15151 417 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 OTX2P32243 289 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 OLIG2Q13516 323 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 RAPSNQ13702 412 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 PLEKHN1Q494U1 663 aaPredicted RBP19.14■□□□□ 0.65
VARS-221ENST00000463184 ANKRD20A2Q5SQ80 823 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 CCDC181Q5TID7 509 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 ANKRD20A1Q5TYW2 823 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 ANKRD20A3Q5VUR7 823 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 HOOK3Q86VS8 718 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 IQCKQ8N0W5 287 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 TFGQ92734 400 aaPredicted RBP19.14■□□□□ 0.65
VARS-221ENST00000463184 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.14■□□□□ 0.65
VARS-221ENST00000463184 SNRNP40Q96DI7 357 aaKnown RBP19.14■□□□□ 0.65
VARS-221ENST00000463184 PPP1R2P1Q96PQ5 205 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 NRTNQ99748 197 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 KLHL25Q9H0H3 589 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 LZTFL1Q9NQ48 299 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 FEZ2Q9UHY8 353 aaPredicted RBP19.14■□□□□ 0.65
VARS-221ENST00000463184 AMFRQ9UKV5 643 aa19.14■□□□□ 0.65
VARS-221ENST00000463184 WIPF3A6NGB9 483 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 ALPPP05187 535 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 GSTM1P09488 218 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 ACRV1P26436 265 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 PSMB4P28070 264 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 PDHA2P29803 388 aa19.13■□□□□ 0.65
VARS-221ENST00000463184 MARCKSL1P49006 195 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms