RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ZNF28P17035 718 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC19A1P41440 591 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 CRADDP78560 199 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SEMA3AQ14563 771 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SNAP47Q5SQN1 464 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 ZNF572Q7Z3I7 529 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 TMEM135Q86UB9 458 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC9B2Q86UD5 537 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 BEND7Q8N7W2 519 aaPredicted RBP13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 NAT14Q8WUY8 206 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 NCSTNQ92542 709 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 ZNF768Q9H5H4 540 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SYBUQ9NX95 663 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 CPNE7Q9UBL6 633 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 CRLS1Q9UJA2 301 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC30A1Q9Y6M5 507 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
SCAMP4-206ENST00000460767 HIVEP3Q5T1R4 2406 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 CDC14CA4D256 554 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 CCDC188H7C350 402 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 AP2A2O94973 939 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 GAS8O95995 478 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 GOT2P00505 430 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 MSH3P20585 1137 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 MGAT1P26572 445 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 NMBRP28336 390 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 LMAN1P49257 510 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 VPS41P49754 854 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 PGDP52209 483 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 SESN2P58004 480 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 DNASE1L3Q13609 305 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 GTF2H3Q13889 308 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 NFE2L1Q14494 772 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 INSCQ1MX18 579 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 FNBP1LQ5T0N5 605 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 AFTPHQ6ULP2 937 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 MPP5Q8N3R9 675 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 CLDN19Q8N6F1 224 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 GDAP1Q8TB36 358 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 MFSD3Q96ES6 412 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 SIGLEC10Q96LC7 697 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 C9orf72Q96LT7 481 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 TRIM55Q9BYV6 548 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 TWSG1Q9GZX9 223 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 BFARQ9NZS9 450 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 MARCH4Q9P2E8 410 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 PRSS21Q9Y6M0 314 aa13.3□□□□□ -0.28
SCAMP4-206ENST00000460767 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 ZCWPW2A0A1B0GU75 182 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 FAM237BA0A1B0GVD1 139 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 DNALI1O14645 258 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 CEACAM4O75871 244 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 GSTM1P09488 218 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 POU3F2P20265 443 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 IDSP22304 550 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 NSG1P42857 185 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 GSTM4Q03013 218 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 INPP5JQ15735 1006 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 UGT8Q16880 541 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 TYSND1Q2T9J0 566 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 PLA2G4EQ3MJ16 856 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 NADK2Q4G0N4 442 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 KIAA0930Q6ICG6 404 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 CERS6Q6ZMG9 384 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 SYDE1Q6ZW31 735 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 PRSS42Q7Z5A4 293 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 HOOK3Q86VS8 718 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 PPIL6Q8IXY8 311 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC34A3Q8N130 599 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 LILRA3Q8N6C8 439 aaPredicted RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 PPHLN1Q8NEY8 458 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 HM13Q8TCT9 377 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 CAPZA3Q96KX2 299 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 TTC25Q96NG3 672 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 GPR87Q9BY21 358 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 OR52A5Q9H2C5 316 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 POT1Q9NUX5 634 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 ACSL5Q9ULC5 683 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 DNAJC16Q9Y2G8 782 aa13.29□□□□□ -0.28
SCAMP4-206ENST00000460767 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 CFAP99D6REC4 459 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 DNAJB5O75953 348 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
SCAMP4-206ENST00000460767 RALBP11234 206 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms